Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03361 ATGACGATACCGAAACGAAGCTATTCTCGAATTGACACATTGGAGCTGAAAGCTCTAATTGTTAGGAAGGTTGGTCATCAGAGAGCTGACAAGTACTTTGATCAGCTTCGAAGATTATTGAGTTCAAAGATAAGCAAGTCAGAGTTTGACAAAATTTGCATCGTGATAATTGGGAGGGAAAATATCCCTCTTCACAATCGACTAATTAGAGCAATTTTGAAGAATGCGTGTCTGGCTAAAGTCCCACCAGTAAGAGGCTCTGCAAAAGCAGGGAGTGCTTTTAGTGTAAAAGATTCAAATGGGCTGCAGAGGAGTTCTATCCAAACGTTGTATGGGGATGCGTTTCCTCCTTCGTTGCGGAGGATTGGCCCTTCAGCTGCTCGAGACCGAAGGTCCAAGGGCCGCCCAAATGTTTTGGGGCCCTTGGGAAAACCCCAATTTGGTCTTGCGTCTGATGAATTTATATGTAAAACACTGGAGCAGCAGAGTGCGACAGAACTGAATTCCCTTGGCAGTAGACCTCCAATTTCCGTTGAAGAAGGAGAGGAGGTTGAACAGATGGCTGGAAGCCCCAGCGTTCAAAGTAGAAGCCCTGTGACGGCTCCTCTTGGTATATCGATGAATTTTGTTCGTGGTGGAAGTCGTCATTCTAATGTTTCATTATGTAGCAAGGGTTATCCAGAGACCTGTCACACCAATGGAGATCTCCCTGACACTAGATCTTTGAGGAGTCGTCTGGAGCAAAAGTTGGAGAAGGAGGGTTTGACCGTGACAGTAGATTGTGTAAATCTATTGAATAATGCACTGGATTCATACCTGAAGAGGTTGATTGAATCCTTTATGGATTTAGCTGGGTCAAGACGTGGAAATGAGCACCTAAGACAGCAAAACAGGCAGATGGCGACCGGTTCAAATGCTTTGCTACCTGGAAGATGCATGCAAAAATTAACTGGATCTGCGGATGCATCTATTTTAGATTTTCGCCTTGCAATGGAATTAAATCCTCAAGTTCTTGGACCAGATTGGCCTATACAACTTGAGAAGATTTGCATACGTGCCTCTGAAGATTGA 1071 0.4444 MTIPKRSYSRIDTLELKALIVRKVGHQRADKYFDQLRRLLSSKISKSEFDKICIVIIGRENIPLHNRLIRAILKNACLAKVPPVRGSAKAGSAFSVKDSNGLQRSSIQTLYGDAFPPSLRRIGPSAARDRRSKGRPNVLGPLGKPQFGLASDEFICKTLEQQSATELNSLGSRPPISVEEGEEVEQMAGSPSVQSRSPVTAPLGISMNFVRGGSRHSNVSLCSKGYPETCHTNGDLPDTRSLRSRLEQKLEKEGLTVTVDCVNLLNNALDSYLKRLIESFMDLAGSRRGNEHLRQQNRQMATGSNALLPGRCMQKLTGSADASILDFRLAMELNPQVLGPDWPIQLEKICIRASED 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03361 356 Coils Coil 352 356 - -
Vimu3g03361 356 PANTHER TRANSCRIPTIONAL ADAPTER 1 4 355 IPR024738 GO:0070461
Vimu3g03361 356 MobiDBLite consensus disorder prediction 118 144 - -
Vimu3g03361 356 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 7 283 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03361 Vimu-Chr3 46977027 46978097 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03361 - - gmx:100817344 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03361 3 46977027 46978097 Vimu3g03361 3 46977027 46978097 ECH