Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03359 ATGGTGGCTGCCATTTCGGAAGACCCATTGACCTCTTCTGAGAAAGACAACAACAACAGCAATGGCACCATACCCAGAAGACCAAAGGGTAGGCAAGTTTCTTCAAGGTACATGTCTCACTCTCCTTCACCTTCGCCTTCTTCAACCACAACAACAACAACAACAACTTCAACCTCAACATCAACGACGAGTTCTTCTTCTCGACGATTCCCTTCCCCTCTTCTTTCTCATTCCACCAATTCCTCTACCCCTTTGGTACCAAAGCGTTCCCAATCGGTGGACCGTCGCCACCCGCGCCCCTCAACACCGCTTCCCGAGGCGGCAAAGCTTCTGGTGACTTCCACTCGGAGCCTGTCGGTTTCCTTTCAAGGAGAGGCCTTTTCGCTGCCCATTAGCAAGACCAAAGCCACCGCCGCCACCCCTCCGCCGCGGAAGGCCGCGACGCCGGAGCGACGGAGGGCTACTCCAGTGAAGGGGGAGAATTCAAGGCCGGCGGATCAGCACCGGTGGCCGGCGAGGACCAGGCAAGTGGATCATCTTTCTAAGAGTGTGGATATCAGTGATAAGAAGAAGGTTGTTGGGAATGGGTTTGGGAAAGTGGTGAGGGATTTGCAGAAGTCAATGGTGGTGGAAGGTGAAAAGAGAAGGGCTTCTTTTGATGGGTTAGGAGGGTTGAGTTTGGATTTGGGGAAAGTTGAGTTGTTGAAGGGTAATAGTAATGCTAATAATAATTCTATTACCAATGCTAATAATCATAATAATAATGACGGTGGTGGTGGGAATTTGGTGAGTAAGTCTTCAATGTCTTGTGATCTCACTGCTTCTGATACTGATAGTGTTTCCTCTGGGAGCACTTCCGGAGCACACGACTCTTCCGGGGCTGTCAAGGGCCCTAAGGAGCCTCGTGGCATTGTCATGTCTGCCAGGTTTTGGCAGGAAACCAATAGTCGGCTTCGTCGCCTGCAGGACCCTGGTTCACCCTTGTCCACCAGCCCTTCTTCTAGGATTGGGTTGCCAAACAAAAATGCTCAGTTGAAAAGATATAATAGTGATGGTCCTATGTTGTCGCCACGAACTGTGGCTTCTCCTGTTAGGGGGAGTGTGAATGCTCGGCCTGCTTCGCCGAGTAAGCTTTGGGCTGGATCCTCTCCTTCAAGAGGGATGCCTAGTCCTGCTAGGGTGAGAAGCACAGTTGCCAGCGCCATCAATAGTGGTTCGGGTAACTCACCATCCATTCTTAGCTTCTCTGCTGATGTGCGGAGAGGGAAGATTGGGGAAGATCGGATATTTGATGCACATACATTGAGGCTTCTGTATAACCGGTATGTTCAGTGGCGGTTCGTGAATGCTAGGGCGGATGCTACATTTATGGTGCAGAAACTAAATGCTGAGAGACATTTGTGGAATGCATGGGTAACAATTTCAGAACTTCGGCATTCAGTCATACTTAAAAGAGTCAAGCTTGTATTACTGAGGCAAAAGTTGAAGTTAACTTCCATTCTTAAAGGACAGATTTCTTATTTGGAGGAATGGGCCCTTCTAGATAGAGATCACTCCAGTTCTTTGCTTGGAGCAACTGAAGCTTTGAAGGCTAGTACACTCCGTCTTCCAGTTGTTGAAAAAGCAATAGCTGATGTACCAAATCTAAAGGATGCTTTGGGGTCAGCAGTTGATGTGATGCAGGCAATGGCATCCTCAATATATTCTCTTTCTTCAAAGGTGGAAGAAACTAACTGCTTGGTGGCGGAAATCCTAAAGGTGACCTCAAAAGAAAGGTTTTTGCTTGAACATTGCAAGGAATTTTTGTCCTCGTTAGCAGCCATGCAGGTCAAGGATTGTAGCTTAAGAACACATACGTTACAACTTTCACGTGCTCCAAATTCCAGCTGCCTGACAACACGTGTGTAG 1908 0.4832 MVAAISEDPLTSSEKDNNNSNGTIPRRPKGRQVSSRYMSHSPSPSPSSTTTTTTTTSTSTSTTSSSSRRFPSPLLSHSTNSSTPLVPKRSQSVDRRHPRPSTPLPEAAKLLVTSTRSLSVSFQGEAFSLPISKTKATAATPPPRKAATPERRRATPVKGENSRPADQHRWPARTRQVDHLSKSVDISDKKKVVGNGFGKVVRDLQKSMVVEGEKRRASFDGLGGLSLDLGKVELLKGNSNANNNSITNANNHNNNDGGGGNLVSKSSMSCDLTASDTDSVSSGSTSGAHDSSGAVKGPKEPRGIVMSARFWQETNSRLRRLQDPGSPLSTSPSSRIGLPNKNAQLKRYNSDGPMLSPRTVASPVRGSVNARPASPSKLWAGSSPSRGMPSPARVRSTVASAINSGSGNSPSILSFSADVRRGKIGEDRIFDAHTLRLLYNRYVQWRFVNARADATFMVQKLNAERHLWNAWVTISELRHSVILKRVKLVLLRQKLKLTSILKGQISYLEEWALLDRDHSSSLLGATEALKASTLRLPVVEKAIADVPNLKDALGSAVDVMQAMASSIYSLSSKVEETNCLVAEILKVTSKERFLLEHCKEFLSSLAAMQVKDCSLRTHTLQLSRAPNSSCLTTRV 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03359 635 Pfam QWRF family 279 596 IPR007573 -
Vimu3g03359 635 MobiDBLite consensus disorder prediction 319 349 - -
Vimu3g03359 635 MobiDBLite consensus disorder prediction 133 182 - -
Vimu3g03359 635 MobiDBLite consensus disorder prediction 146 182 - -
Vimu3g03359 635 MobiDBLite consensus disorder prediction 319 392 - -
Vimu3g03359 635 MobiDBLite consensus disorder prediction 1 107 - -
Vimu3g03359 635 MobiDBLite consensus disorder prediction 243 303 - -
Vimu3g03359 635 MobiDBLite consensus disorder prediction 243 291 - -
Vimu3g03359 635 PANTHER AUGMIN FAMILY MEMBER 12 624 - -
Vimu3g03359 635 MobiDBLite consensus disorder prediction 10 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03359 Vimu-Chr3 46963235 46967767 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03359 - - gmx:100815206 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03359 3 46963235 46967767 Vimu3g03359 3 46963235 46967767 ECH