Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03333 ATGAACACATTTGGTTCAGAACTTGGCACTAGTGGCTGTGAGTCTGGTTGGACTCTATACCTTGAGCACTCTTTCCTTAACCAGAATGCTTCTTCACATCGGGGTGGAACTCAGGGGTTCTGTGAAGAGGAACACAAAGACAAAAGATTCAAAGATGAAGACTCTGGGGAGGAGGATTTGTCCATGCTTTCTGATGCTTCTTCTGGACCTCCTCTTTTTCCACACTACGACTCTTACTTCAAAGAAGATGTCAATGGTTGCTTCTATTCGGCTTCCAAGGCAGTCAAGCTCGCCAAGAGTGGTAAAAAGAAGCAGAAAGTTAAGGAAAATCAACACCTTGAGGATCAACATCTCACTTTTCTTCATGACACTGCCAGCTCTCCTGTCTTTGACTTTTCCACTGACAATGTTGCAAGGGGCAACCAACAAACATCTGTAGGGAGTGTGGTTGATTATTCACAAGGTTTTTCTGCAACTTATTTTATGGGAAGATCGTCATTCCAAGAAGAACACTTCGGTTTCTTACAATCAGAAAATGAAGTTGAAGGCAACAAATGGTATGGAGGGAAAAGGATGGGAATAAGGTGA 588 0.4286 MNTFGSELGTSGCESGWTLYLEHSFLNQNASSHRGGTQGFCEEEHKDKRFKDEDSGEEDLSMLSDASSGPPLFPHYDSYFKEDVNGCFYSASKAVKLAKSGKKKQKVKENQHLEDQHLTFLHDTASSPVFDFSTDNVARGNQQTSVGSVVDYSQGFSATYFMGRSSFQEEHFGFLQSENEVEGNKWYGGKRMGIR 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03333 195 MobiDBLite consensus disorder prediction 32 67 - -
Vimu3g03333 195 MobiDBLite consensus disorder prediction 38 57 - -
Vimu3g03333 195 PANTHER OSJNBA0091C07.3 PROTEIN 10 163 IPR044670 GO:0009690|GO:0009691
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03333 Vimu-Chr3 46752442 46753297 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03333 - - pvu:PHAVU_007G046700g 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03333 3 46752442 46753297 Vimu3g03333 3 46752442 46753297 ECH
Vimu7g02176 7 19223217 19224593 Vimu3g03333 3 46752442 46753297 PCT