Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03323 ATGATTTTGAAGTCAATAGTTGCATCAGCGAGCGATCTAAGTGTAGTGAGTGTTGCTGGAAACGCTCCGCTCGAATTCAAGAATCGGGTTTTTGGCGGCCGAGTCATCCGCCTCGGATTTCGTTTTAACAGAGGGAGATGGAAGGGGAATGAAAGGTTTGACTTTAAGGTTCGTGCTGCTGTGGAGGTGGGAGTGGGGAGTTCAAAGAGTAAGGCTTTGCAGGGTAATTCTGGATTGGATGTGGTTTCAGAGGGAGAGTTAACGGTAAAGGGGTTTGCGGGGTTGCGGAAGACCAAACTCGTCTGCACAATTGGTCCTGCTTGCAGCTCTTTGGAGGAACTTGAGAATTTGGCCACAGGAGGCATGAATGTTGCCAGGCTCAACATGTGCCATGGCACCAGGGAGTGGCACCGTGATGTGATTAGGAAGATCAAGAAGTTGAATGAGGAGAAAGGGTTCTGTGTTTCTGTGATGATTGACACTGAAGGTAGTCAGATTCATGTAGTTGATCATGGAGCCTCGTCCTCGGTTAAAGTAGAAGAAGGTTCAATTTGGCATTTTACTGCTGAGCATTTTGAGGGTTCTCGCCCATTCACAGTACAGACAAACTACACAGGTTTTTCTGAAGATATTGAAGTTGGTGATGAACTTGTTATTGATGGTGGAATGGCTTGCTTTGAAGTCGTTGAAAAGAAAGGAAATGATTTGCATTGTAAGTGTATCGATGCTGGTCTTTTCCTTCCTGGAGCTAAATTTAGTTTCTGGAGAGATGGAAAGCTTGTTAGGAGGAATTACAAGCTCCCCACTCTATCAACAAAGGATTGGGCTGACATTGACCTCGGTATAGCTGAGGGTGTTGACTTTTTTGCCTTATCCTTTGTCAATCACGCTGATTCTGTTAAGGATCTAAAGAACTACCTCTCCACGAAGTCAACCAAATCCATTAAAGTTTTGTCGAAGATAGAAAGCTTAGAATCTCTTCATAAACTTGAGGAAATAGTGCGAGCTTCTGATGGAATCATGGTGGCTCGGGGTGATCTTGGGGTCGAAATACCACTTGAACAGATTCCTACAGTCCAAGAGGATATAATTTACGTATGCAGACAACTAAACAAGCCAGTGATTGTAGCTTCTCAGCTTCTTGAGTCAATGGTCGAGTATCCAACCCCAACACGTGCCGAGGTAGCAGATGTTTCTGAAGCAGTTCGACAGTATGCTGATGCTTTGATGTTGTCTGGTGAATCAGCTATTGGGTCATATGGGCGTAAAGCTTTGGCAGTCTTGGATATGACTAGCAGTAGAATGGAATCATGGAATCGGGAGGAGAACAAGCAGAATCTTCTCAACCATCACCAACTTGGAGCAGAATTGCCAGAATGCATCACTGAGCAAATATGTAATTGTGCCGTTGAAATGGCCAACAACCTTGGTGTGGATGCCATCTTTGTGTACACGAAGCATGGACACATGGCATCACTTCTATCACGCAACCGCCCAAATCCTCCTATCTTTGCCTTCACCGACTATGAAAGTACCCGAATGGCTCTGAATCTGTTATGGGGGGTTGTACCCCTTCTGGTTGATTTATCAGATGATGCTGAATCTAACATCTCAAAGTCAGTCCAACTTATGGAATCCAAAGGATTGATCAGACAAGGAGATGTTGTTCTAGTGGTCTCGGATATTGCTCACACACGATCCTCTCCTATGGCTTTCCAATCAATTCAGGTGAAGACTATTGCCTAA 1746 0.4467 MILKSIVASASDLSVVSVAGNAPLEFKNRVFGGRVIRLGFRFNRGRWKGNERFDFKVRAAVEVGVGSSKSKALQGNSGLDVVSEGELTVKGFAGLRKTKLVCTIGPACSSLEELENLATGGMNVARLNMCHGTREWHRDVIRKIKKLNEEKGFCVSVMIDTEGSQIHVVDHGASSSVKVEEGSIWHFTAEHFEGSRPFTVQTNYTGFSEDIEVGDELVIDGGMACFEVVEKKGNDLHCKCIDAGLFLPGAKFSFWRDGKLVRRNYKLPTLSTKDWADIDLGIAEGVDFFALSFVNHADSVKDLKNYLSTKSTKSIKVLSKIESLESLHKLEEIVRASDGIMVARGDLGVEIPLEQIPTVQEDIIYVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSYGRKALAVLDMTSSRMESWNREENKQNLLNHHQLGAELPECITEQICNCAVEMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTDYESTRMALNLLWGVVPLLVDLSDDAESNISKSVQLMESKGLIRQGDVVLVVSDIAHTRSSPMAFQSIQVKTIA 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03323 581 SUPERFAMILY PK C-terminal domain-like 457 563 IPR036918 -
Vimu3g03323 581 FunFam Pyruvate kinase 269 435 - -
Vimu3g03323 581 PRINTS Pyruvate kinase family signature 153 169 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vimu3g03323 581 PRINTS Pyruvate kinase family signature 344 368 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vimu3g03323 581 PRINTS Pyruvate kinase family signature 394 412 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vimu3g03323 581 PRINTS Pyruvate kinase family signature 413 429 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vimu3g03323 581 PRINTS Pyruvate kinase family signature 286 300 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vimu3g03323 581 PRINTS Pyruvate kinase family signature 369 393 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vimu3g03323 581 PRINTS Pyruvate kinase family signature 317 343 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vimu3g03323 581 SUPERFAMILY PK beta-barrel domain-like 166 249 IPR011037 -
Vimu3g03323 581 NCBIfam pyruvate kinase 96 566 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vimu3g03323 581 Gene3D - 98 428 IPR040442 -
Vimu3g03323 581 ProSitePatterns Pyruvate kinase active site signature. 315 327 IPR018209 GO:0004743|GO:0006096
Vimu3g03323 581 FunFam Pyruvate kinase 164 268 - -
Vimu3g03323 581 Gene3D - 429 572 IPR036918 -
Vimu3g03323 581 Pfam Pyruvate kinase, barrel domain 96 437 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vimu3g03323 581 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 90 438 IPR015813 GO:0003824
Vimu3g03323 581 Pfam Pyruvate kinase, alpha/beta domain 463 563 IPR015795 -
Vimu3g03323 581 FunFam Pyruvate kinase 431 571 - -
Vimu3g03323 581 PANTHER PYRUVATE KINASE 79 561 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vimu3g03323 581 Gene3D - 165 267 IPR015806 GO:0004743|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03323 Vimu-Chr3 46678332 46682039 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03323 K00873 - gmx:100780644 1025.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03323 3 46678332 46682039 Vimu3g03323 3 46678332 46682039 ECH