Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03144 ATGGAGAAGACAACACTTAAAGTTCGATGCCAGAGGATTGGGTGCGACGCCACCTTCTCCGAGGACGACAATCCCGACGGTTCCTGTCGATACCATGATTCGGTACTCTTTCTCTCTCTCTCTCTCTGGCTCTCTCGCATAACCCTCGTGTCCAAGTCACACCAGATTAGGGGAGTGGAACCAGCAGTAATCAGAAACTTGAACCGGGGTCCTAAGCAGTTCAGTAACCACACCAAAAGTCAAACAAGCACGCAAGCCAACAAAATGTTGAATGCAGAAGCAGAAGAACACCATGCTGAGCCTATATTTCATGATGGAACGAAAGAATGGAGTTGTTGCAAGAAAAGAAGTCATGATTTTAGCTTGTTTTTGGAAATTCCGGGATGTAAGACCGGAAAACATACAGCAGTCAAGCAAGTAATTGCTCCAGTGAAGAAGAACACCACGCCCTCTCCAACTGCTGTTTCTTCAACCAATGCTTCATCAAAGGACTCTTGTTCTAGATGTAGGCAGGGTTTCTTTTGCTCAGAACATGGTTCTCAAAGCAAACCAGTTAGCGTTGTAGACAAGTCCCCAAATCTTGTTGGAGATGCCTCTGCTGTTAACAATTCAAGTGTTCAGGCTCCGAAACCTAAGAAGATAGTCGATATAAATGAGCCCCAAACATGCAAAAATAAAGGATGCGGTCAAACTTTCAAGGAAAAGGATAATCATGACACTGCTTGCAGCTACCATCCCGGCCCTGCTGTTTTTCATGACCGGATGAGAGGGTGGAAGTGCTGTGATATTCATGTAAAAGAATTTGATGAGTTTATGAACATTCCTCCATGCACAAAGGGATGGCATAGTGGGGATCCAGAATCCTGA 867 0.4498 MEKTTLKVRCQRIGCDATFSEDDNPDGSCRYHDSVLFLSLSLWLSRITLVSKSHQIRGVEPAVIRNLNRGPKQFSNHTKSQTSTQANKMLNAEAEEHHAEPIFHDGTKEWSCCKKRSHDFSLFLEIPGCKTGKHTAVKQVIAPVKKNTTPSPTAVSSTNASSKDSCSRCRQGFFCSEHGSQSKPVSVVDKSPNLVGDASAVNNSSVQAPKPKKIVDINEPQTCKNKGCGQTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMNIPPCTKGWHSGDPES 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03144 288 ProSiteProfiles CHORD domain profile. 223 282 IPR007051 -
Vimu3g03144 288 FunFam Cysteine and histidine-rich domain-containing protein RAR1 214 285 - -
Vimu3g03144 288 ProSiteProfiles CHORD domain profile. 10 134 IPR007051 -
Vimu3g03144 288 PANTHER CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN RAR1 3 34 IPR043316 -
Vimu3g03144 288 Pfam CHORD 93 134 IPR007051 -
Vimu3g03144 288 Pfam CHORD 222 282 IPR007051 -
Vimu3g03144 288 Gene3D - 215 285 - -
Vimu3g03144 288 Gene3D - 68 138 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03144 K13458 - gmx:100819671 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03144 3 45210034 45216143 Vimu3g03144 3 45210034 45216143 ECH