Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03142 ATGCTTCCCAAATCAATTCACCCCTCACTGGAACCTCAACCCAAAACACTTCATAACAAAGCCACCCTCACTTCTTCCATCACCTCCCTCCTCAAACCGCTTTCCTCACCCCAAATCCCTCGCTCATGGATATTCCTCACTGTCCTCTTCGTCCAGATCCTCCTCCTCTGCAACCTCCGCATGTTCTCCTCCTCAATCCCCTCTCCTCTCCCCTCCCCTATCGTCCATCACTCTTCCAAAGCCTTAGACCAATGCGGCTCCGGCAAGGTCTTCGTCTACGACCTCCCCCAAACCTTCAACTACGAAATCCTCCAGAATTGCGACAACCTCAACCCCTGGGGCTCCCGCTGCAACTCCCTCTCTAACAACGGATTCGGCCAGAACGCCGCCGCGCTGGCCGGAATCGTTCCTGAGGATCTCCTCCCGGCGTGGCACTGGACCGACCAGTTCGTCACTGAAGTCATCTTCCACAACCGATTATTGAATCACAAGTGCAGGGTTAAGGAGCCGGAATCCGCTACGGCATTCTACATACCGTTCTACGCTGGACTCGCGGTTGGGAAGTACCTGTGGCTCAACTCAACAGCTGACGAACGCGATCGCCACTGCGACATGATGCTGGACTGGGTTATGGACCAACCATATTTTAAAAGATCAAACGGTTGGGATCATTTTATTACCATGGGACGCATCACATGGGATTTTCGCCGCTCCTCGGAACGCGATTGGGGTTCCAGCTGCATCTACAAGCCTGGGCTAAGAAACGTCACGCGCCTTCTCATAGAGCGTAATCCTTGGGACTATTTCGACGTAGGTGTTCCCTACCCCACCGGATTCCATCCGCGCTCTAAATCCGACGTCACGCGCTGGCAGAACTTCGTCCACGAGCGCCGACGCAATGCGCTCTTCTGCTTCGCCGGCGCCCCTCGACGCGCGTTCCGCCAAGACTTCCGCGGGATTTTGCTGAGCCAATGCCGCGACGCGGGCGAGTCGTGCCGCACCGTGAACTGCACTGGGACGCGGTGCTCCAACGGCACGTCGGCGATTCTCGAAACGTTTCTGGACTCCGATTTCTGCTTACAGCCGAGAGGGGACAGCTTCACACGCAGGTCCATTTTCGATTGCATGGTGGCCGGTTCGATTCCGGTTTTCTTCTGGCGGCGAAGCGCGTACCTGCAGTACGAGTTGTTCTTGCCGGTCGAACCGGGAAGTTACTCAGTTTACATAGATCGAAACGCAGTTAAGAATGGAACCGTAACCGTGAAAAACGTGCTGGAGAAGTTCAGCAGGGAGAAAGTACGGCAAATGAGGGAGAAAGTGATTGAGTACATTCCGAGGTTGATTTACGCTAACTCGAAAGATGGGTTAGACGATATGAAGGATGCGTTCGATGTTGCCATCGAAGGTGTGCTGAAAAGGTTCAAGGAACAGGAACAACCGATGTTTCATAAGTGGAAATAA 1461 0.5407 MLPKSIHPSLEPQPKTLHNKATLTSSITSLLKPLSSPQIPRSWIFLTVLFVQILLLCNLRMFSSSIPSPLPSPIVHHSSKALDQCGSGKVFVYDLPQTFNYEILQNCDNLNPWGSRCNSLSNNGFGQNAAALAGIVPEDLLPAWHWTDQFVTEVIFHNRLLNHKCRVKEPESATAFYIPFYAGLAVGKYLWLNSTADERDRHCDMMLDWVMDQPYFKRSNGWDHFITMGRITWDFRRSSERDWGSSCIYKPGLRNVTRLLIERNPWDYFDVGVPYPTGFHPRSKSDVTRWQNFVHERRRNALFCFAGAPRRAFRQDFRGILLSQCRDAGESCRTVNCTGTRCSNGTSAILETFLDSDFCLQPRGDSFTRRSIFDCMVAGSIPVFFWRRSAYLQYELFLPVEPGSYSVYIDRNAVKNGTVTVKNVLEKFSREKVRQMREKVIEYIPRLIYANSKDGLDDMKDAFDVAIEGVLKRFKEQEQPMFHKWK 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03142 486 Pfam Exostosin family 85 423 IPR040911 -
Vimu3g03142 486 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 88 469 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03142 Vimu-Chr3 45187799 45189259 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03142 - - gsj:114403132 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03142 3 45187799 45189259 Vimu3g03142 3 45187799 45189259 ECH