Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03138 ATGATAATTTATTTGAGCAGTGGTGATCCAAAAGGGACAGATTGGCTGCCGGCGGAATGTGATGTCTCAATTCGACCGGGATGGTTCTGGCATAAGTCAGAATCACCAAAAAGGCTGAGCAAGTTGCTTGATATTTATTACAACTCAGTTGGGAGAAACTGTGTGTTACTTCTCAATGTACCTCCAAATAAAAGTGGCCTTATAACTGATGTTGATGCTCAAAGATTGAAAGAGTTTAGAAGTGCAATTAACACTATTTTTCAACACAATCTTGCCCAAGATTGTTTTGTAAAAGTTAGTAGCCAAAGGGGGGGTTTCGGAGCAGAAAACATGCTAGACAGTGACCATTTGTGGTCCTATTGGACCCCAAAGGATGATGGCGGTGAAAAAGACCATTGGATTGAAATTTGGGCAAAGGATGAGAGTTTTTTGAGATTCAACGTGATTTCAATACAAGAGGCAATTGGACTTGGTCAAAGGATCAAACGGCATGAAATCTATGCGGATGATAAATTGATCGTGAAAGCAACAACAGTGGGTTACAAGAGGCTTCATAGGCTTGATCTGGGTGAGGTGCAGGCTCGTGTTGTGAGGATCACAATCAGAGAATCAAAAGCAATGCCTCTTATTTCTTCTATTGGTTTGTATTTTGATCCTTTTTGGCACTCTAAATTTACTGTCACATGA 687 0.4047 MIIYLSSGDPKGTDWLPAECDVSIRPGWFWHKSESPKRLSKLLDIYYNSVGRNCVLLLNVPPNKSGLITDVDAQRLKEFRSAINTIFQHNLAQDCFVKVSSQRGGFGAENMLDSDHLWSYWTPKDDGGEKDHWIEIWAKDESFLRFNVISIQEAIGLGQRIKRHEIYADDKLIVKATTVGYKRLHRLDLGEVQARVVRITIRESKAMPLISSIGLYFDPFWHSKFTVT 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03138 228 Gene3D Glycosidases 3 93 - -
Vimu3g03138 228 Gene3D - 96 217 - -
Vimu3g03138 228 SUPERFAMILY Galactose-binding domain-like 83 203 IPR008979 -
Vimu3g03138 228 PANTHER ALPHA-L-FUCOSIDASE 9 223 IPR000933 GO:0004560|GO:0005975
Vimu3g03138 228 SUPERFAMILY (Trans)glycosidases 7 84 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03138 Vimu-Chr3 45152039 45152857 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03138 K01206 - gmx:100805382 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03138 3 45152039 45152857 Vimu3g03138 3 45152039 45152857 ECH