Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03121 ATGGCTTCAAACCCTTCACTTCTCCCTGAGATCGGACCTGACGGTCTCGCTAAAGAAGCCCCCGTCATCAGCTACACAGAGAAGATCATCGAAGCAGAACAGCTTCAATTGCAGAAGCTTGAAGAGCAGTATTATTTTGTTATTATCTTCAGATACATTCAAGAAAACTATTCTAAAATTCGTGATGTGGAGCGTGAGCTTGCAAATCTTTCACTGGAGATGAAACTTACAGCTGGTCCGAAAAAAGCAGCACTTGAACATTTAAGAAAGAAAATTGAGACGTCAACAGAAAGAATTCGTGTGGCCAAGCTAAAGGAAGAGCAGGCACGGAAGGTGTGGGAATCAGCCTCACAAGCAGTACGCGATGAGGAAGCAATGAAACAAAAGCTATGTGAAGACTTGAGTAATCTGGTTCAAGAAAGCAGTAACTCTCAGTTTGCTCGGCTGGAGGAATTAAAAAGAAGGTTGGAAGCTTTGAATCCAAGTCGTGCATCAACTAATCTTTATCATGATGGGAGATCGGCAGCTTCTTCTCAGGATAGTACACCCCAGCATGGTTCCTCTGTTCCCAATGCAAAGGAGTCAAATGAGGGATCAACCGAGAGCGTTTCCAACCAAAGTAATGGTGAGAAAGCTGCAGCGAGAAATGGACCTAATCAGCAGCCACATAATGAAGGCGAAGGAAGAAGTAAGAAGAAAGTCAACTTGCAATCAAAAGGGAAGGGAATTGGTGTTGTGACCAAGGGTAGATCTTCAACTCCTGGCTGGACTGGGGCTGGCTTCGATGTAGATGGCAGAACCTGA 804 0.4465 MASNPSLLPEIGPDGLAKEAPVISYTEKIIEAEQLQLQKLEEQYYFVIIFRYIQENYSKIRDVERELANLSLEMKLTAGPKKAALEHLRKKIETSTERIRVAKLKEEQARKVWESASQAVRDEEAMKQKLCEDLSNLVQESSNSQFARLEELKRRLEALNPSRASTNLYHDGRSAASSQDSTPQHGSSVPNAKESNEGSTESVSNQSNGEKAAARNGPNQQPHNEGEGRSKKKVNLQSKGKGIGVVTKGRSSTPGWTGAGFDVDGRT 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03121 267 Coils Coil 85 105 - -
Vimu3g03121 267 MobiDBLite consensus disorder prediction 163 224 - -
Vimu3g03121 267 MobiDBLite consensus disorder prediction 163 267 - -
Vimu3g03121 267 Coils Coil 23 43 - -
Vimu3g03121 267 Coils Coil 53 73 - -
Vimu3g03121 267 Coils Coil 120 140 - -
Vimu3g03121 267 PANTHER ACI13 1 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03121 Vimu-Chr3 44935677 44939418 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03121 - - gmx:100801668 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03121 3 44935677 44939418 Vimu3g03121 3 44935677 44939418 ECH
Vimu8g01947 8 25216722 25220045 Vimu3g03121 3 44935677 44939418 PCT