Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03116 ATGTCGGAGAGGCTAACACCAACGAGGAAGAGGAAAATGGGAGACGGAGAGGATACAACTCCAAAGAAACCTGCGGCAAAATGGCCTCTCATCAAACCCAAAAAGAATCTTCAGATTACCCGACTCCGAGATTTCGATCTCTTCACGGTCCAGAATTTTTTCTCCTCTGCTGAATCGAAGGCATTCGTTAAAAATGCTGAGTTAATTGGTTTTGCTCATCAAGGGAGTCTAGGTCCTACTTATGGTGAAGCTTACAGAGATAATGATCGAATCTCGGTGGATGACCCTGTCCTTGCAGATACTATTTGGGAGTCTGGACTTAGCAAACTATTCTCTGATATAAAAGTTCGTGGAAAGGTTGCTGTAGGCCTGAATCCAAATATTAGATTCTATAGGTACAAGACTGGCCAGCGGTTTGGACGGCACATTGACGAAAGTGTTAATCTTGGAGATGGAAAACGTACTTATTATACTCTTCTAGTGTATTTGAGCGGTGGGCCTGGTGAACTTAAATCAAAGCCGAAAAATGACTCCAGCAATTCCTCAGTTTCATCTGTTGATCCTTTAGTTGGAGGAGAAACAGTTTTTTATGGTTTAAGAAATAAGATTGTGGCTGAGGTGGCTCCTACTGAAGGGACAGCACTTCTTCACCTTCACGGAGATAAATGTTTGTTGCATGAAGCCAGAAATGTTACCAAGGGTATCAAGTATGTGTTTCGTTCAGATGTGGTATTTGCTTGA 741 0.4238 MSERLTPTRKRKMGDGEDTTPKKPAAKWPLIKPKKNLQITRLRDFDLFTVQNFFSSAESKAFVKNAELIGFAHQGSLGPTYGEAYRDNDRISVDDPVLADTIWESGLSKLFSDIKVRGKVAVGLNPNIRFYRYKTGQRFGRHIDESVNLGDGKRTYYTLLVYLSGGPGELKSKPKNDSSNSSVSSVDPLVGGETVFYGLRNKIVAEVAPTEGTALLHLHGDKCLLHEARNVTKGIKYVFRSDVVFA 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03116 246 FunFam 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 34 241 - -
Vimu3g03116 246 SMART p4hc 45 244 IPR006620 GO:0005506|GO:0016705|GO:0031418
Vimu3g03116 246 MobiDBLite consensus disorder prediction 1 22 - -
Vimu3g03116 246 MobiDBLite consensus disorder prediction 1 27 - -
Vimu3g03116 246 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 123 246 IPR005123 -
Vimu3g03116 246 Gene3D q2cbj1_9rhob like domain 35 241 - -
Vimu3g03116 246 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 44 240 IPR045054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03116 Vimu-Chr3 44900234 44901697 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03116 - - vun:114191541 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03116 3 44900234 44901697 Vimu3g03116 3 44900234 44901697 ECH