Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03109 ATGAAAACCATCATTGATGTGGTAAACTCAAAAGCATTATCAAAGTTCCGGTACCCCAACTTGCCAGTTCAAGCTCTAATGGACTTGATGTTGCTGATACCAATGAACTTGAGGCCAAAACATGTCAATACTGCTTATTCTTTACGACAGTATTGCATAGACACTGTGCTAACAATTTGGCATTACCATGGAGGGTGCCTCACTGGTAAAGTTGTTGATCATAATTATAAGGTTATTGGGGTCGAAGCTCTGAGGGTAATTGATGGATCCACCTTTTATCGCTCACCTGGGACTAATCCTCAAGCCACTGTCATGATGCTTGGAAGGTATATGGGAGAGCAAATTATAAACGAAAGATTCTCCGGTGGACAGAAAAGTGAAGGGATCAATTGA 393 0.4122 MKTIIDVVNSKALSKFRYPNLPVQALMDLMLLIPMNLRPKHVNTAYSLRQYCIDTVLTIWHYHGGCLTGKVVDHNYKVIGVEALRVIDGSTFYRSPGTNPQATVMMLGRYMGEQIINERFSGGQKSEGIN 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03109 130 Pfam GMC oxidoreductase 40 109 IPR007867 GO:0016614
Vimu3g03109 130 Gene3D - 1 58 - -
Vimu3g03109 130 Gene3D - 59 108 IPR036188 -
Vimu3g03109 130 PANTHER OSJNBA0019K04.7 PROTEIN 1 120 - -
Vimu3g03109 130 SUPERFAMILY FAD/NAD(P)-binding domain 42 118 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03109 Vimu-Chr3 44871023 44875340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03109 1 119 Miscellaneous Gene Families AT5G51950 66.387 1.90e-58 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03109 - - vun:114192811 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03109 3 44871023 44875340 Vimu3g03109 3 44871023 44875340 ECH