Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03108 ATGGGTTCCTCTGCTGCCAGAAAAAACATTGCAGATTCATCGTCCTGGTACTGTGCCATGATGCTGTTGGGCATGATTCTGTTGGGGTCTGTAAGGGAAAGCTCTGTGGCAGGAGAAGCTGAGGCTGTAAAAGGGAACAACCTCCGTGAAGGACCGTGTGATGAAATCTACGTTGTGGGAGAAGGAGAGACCCTGCACACGATCAGCGACAAGTGCAATGACCCGTTTATCGTGGAGCGGAACCCGCATATCCATGACCCGGATGATGTTTACCCTGGCCTTGTCATCCAAATCATCTCTACCCGTCAATCCTGA 315 0.5111 MGSSAARKNIADSSSWYCAMMLLGMILLGSVRESSVAGEAEAVKGNNLREGPCDEIYVVGEGETLHTISDKCNDPFIVERNPHIHDPDDVYPGLVIQIISTRQS 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03108 104 Gene3D LysM domain 48 104 IPR036779 -
Vimu3g03108 104 CDD LysM 56 98 IPR018392 -
Vimu3g03108 104 PANTHER EMBRYO SAC 1 7 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03108 Vimu-Chr3 44861221 44861535 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03108 - - pvu:PHAVU_007G066300g 185.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03108 3 44861221 44861535 Vimu3g03108 3 44861221 44861535 ECH