Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03095 ATGGCTAACACTGATTCTTCTTCCCCCTCCATTTTCAACGTAAGAAAAACGCCAACCTTCATCCTCGTTCTTCTTCTCTGCATCGCCTCCTACTTCCTAGCCGCGTACCACCAAGGAGAGCCCCTCCTCACCACCGCGACCACCGCCTCCCTCCACCTCTCCGCATCGTGCAACCACCTCACTGCCCAGTCTTCTAGAACGTTCCCACGCTGCAGCGCCAACTTCAGTGAGTACACGCCATGCGAAGATCCTCATCGGTCTCTAGGGTACAAGCGGCACAGAATGATATACCGAGAGAGGCACTGCCCCGAGGAGCCCTTGAAATGTAGGGTTCCTGCCCCTCATGGATATCGAAATCCCTTTCCCTGGCCCGCGAGTAGAGACCGTGCGTGGTTCGCTAACGTCCCCCACCGTGAGCTCACCGTGGAGAAGGCCGTGCAGAACTGGATCCGCTTCGAGGGCGAGCGCTTCGTTTTTCCCGGTGGCGGAACCACCTTCCCCAACGGCGCCGATGCCTACATTGAGGACATCGGAAAGTTGATTAATCTCAGAGACGGCACCATTAGAACTGCTCTGGACACTGGTTGTGGGGTGGCTAGTTGGGGAGCGTATCTTCTCTCACGCAATATACTAACATTGTCAATGGCACCAAGGGACACCCACGAAGCACAGGTTCAATTTGCCCTTGAGCGTGGAGTTCCTGCACTCATTGGAATTCTTGCCACTAAGAGGCTACCTTTCCCTTCAAGAGCTTTTGACATGTCCCATTGCTCTCGCTGCCTCATCCCATGGGCTGAATATGATGGAGTTTTTCTGAACGAAGTGGATCGAGTTCTACGCCCTGGCGGGTATTGGATTCTGTCTGGGCCACCAATCAACTGGAAGAAATACTGGAAAGGGTGGCAAAGAACGGAGAAAGATTTGAACGAAGAGCAGACCAAAATTGAGGAGGTAGCCAAAAGCCTTTGCTGGAACAAGCTAGTGGAGAAGGATGATATAGCTATCTGGCACAAACCCAAAAATCATTTAGATTGTAAGCTCACACAAAAGAGGTCTTTTTGCAGTGCACAAAATGACCCTGACAAAGCCTGGTATACCGATATGCAGACATGTTTGACTCGTCTTCCTGAAGTGTCAAACAGAGAAGAGACTTCGGGTGGGGTGTTGGATGATTGGCCAAAGAGATTAAAATCCACCCCACCTAGGATTTATAGGGGTACCATAGAAGGGGTTACAGATGAAACCTTTTCAAAAAATCATGAGCTGTGGAAGAAAAGGGTATCATATTACAAGACAGTGAACAAACTACTAGGAACCGAGAGATACCGTAATCTTTTGGATATGAATGCTTATTTGGGCGGATTTGCTGCTGCACTAATTGAGGACCCTGTTTGGGTCATGAATGTGGTTCCTGTTCAGGCTAAGGTTGACACACTTGGATCAATATATGAACGCGGGTTGATTGGAATATATCATGACTGGTGTGAACCAATGTCTACTTATCCTAGAACTTATGATCTAATTCATGCTGATTCAGTGTTCAGTCTTTACAGTAACAGATGTGGCTTGGAAGACATTCTGTTAGAAATGGATAGGATTGTTCGACCTGAAGGATGTGTTATCATACGAGATGACGTTGATATGTTGGTCAAAGTAAAGAGCATTGTGAATGGATTGGAATGGGACAGTATAATTGTAGACCATGAAGATGGGCATCTTAAGAAGGAGAAAGTTCTATTTGCTGTGAAGAAGTATTGGACGGAAAATTAA 1770 0.4768 MANTDSSSPSIFNVRKTPTFILVLLLCIASYFLAAYHQGEPLLTTATTASLHLSASCNHLTAQSSRTFPRCSANFSEYTPCEDPHRSLGYKRHRMIYRERHCPEEPLKCRVPAPHGYRNPFPWPASRDRAWFANVPHRELTVEKAVQNWIRFEGERFVFPGGGTTFPNGADAYIEDIGKLINLRDGTIRTALDTGCGVASWGAYLLSRNILTLSMAPRDTHEAQVQFALERGVPALIGILATKRLPFPSRAFDMSHCSRCLIPWAEYDGVFLNEVDRVLRPGGYWILSGPPINWKKYWKGWQRTEKDLNEEQTKIEEVAKSLCWNKLVEKDDIAIWHKPKNHLDCKLTQKRSFCSAQNDPDKAWYTDMQTCLTRLPEVSNREETSGGVLDDWPKRLKSTPPRIYRGTIEGVTDETFSKNHELWKKRVSYYKTVNKLLGTERYRNLLDMNAYLGGFAAALIEDPVWVMNVVPVQAKVDTLGSIYERGLIGIYHDWCEPMSTYPRTYDLIHADSVFSLYSNRCGLEDILLEMDRIVRPEGCVIIRDDVDMLVKVKSIVNGLEWDSIIVDHEDGHLKKEKVLFAVKKYWTEN 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03095 589 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 99 307 IPR029063 -
Vimu3g03095 589 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 429 547 IPR029063 -
Vimu3g03095 589 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 54 587 IPR004159 GO:0008168
Vimu3g03095 589 Gene3D Vaccinia Virus protein VP39 170 353 IPR029063 -
Vimu3g03095 589 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 77 583 IPR004159 GO:0008168
Vimu3g03095 589 FunFam Putative methyltransferase PMT15 144 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03095 Vimu-Chr3 44725416 44729282 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03095 - - gmx:100778314 1052.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03095 3 44725416 44729282 Vimu3g03095 3 44725416 44729282 ECH