Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03091 ATGTTGTTGTCCTCGGCTCCAATTGTATCTTCATTTATAGAATGCTCCATAATTACTCAGCTTTTCTCAGCATGCTCCTTGTTCATCACTCACGGCACCCCAGACCCCATTCCAGGGTCCCCTTGTTGTGATGCTATGTCTGGGGTGAACAATATTGCCAACACTGCTGATAATAGGCAATATGTTTGTAGGTGCTTAATGGACCTCATCGACAATTTCAGTTCAAATGCCTCAGCCATTGGTATCTTACCAGGCTTATGTGGTATCTCTTTGGGATTCAATATTGATCCTAATGCAGACTGTAGTTTATAA 312 0.4231 MLLSSAPIVSSFIECSIITQLFSACSLFITHGTPDPIPGSPCCDAMSGVNNIANTADNRQYVCRCLMDLIDNFSSNASAIGILPGLCGISLGFNIDPNADCSL 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03091 103 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 13 102 IPR036312 -
Vimu3g03091 103 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 8 102 IPR000528 GO:0006869|GO:0008289
Vimu3g03091 103 Gene3D - 13 103 IPR036312 -
Vimu3g03091 103 CDD nsLTP1 13 102 - -
Vimu3g03091 103 PRINTS Plant phospholipid transfer protein signature 14 30 IPR000528 GO:0006869|GO:0008289
Vimu3g03091 103 PRINTS Plant phospholipid transfer protein signature 58 73 IPR000528 GO:0006869|GO:0008289
Vimu3g03091 103 PRINTS Plant phospholipid transfer protein signature 74 91 IPR000528 GO:0006869|GO:0008289
Vimu3g03091 103 PRINTS Plant phospholipid transfer protein signature 92 103 IPR000528 GO:0006869|GO:0008289
Vimu3g03091 103 PRINTS Plant phospholipid transfer protein signature 37 51 IPR000528 GO:0006869|GO:0008289
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03091 13 101 Acyl Lipid Metabolism Gene Families AT5G01870 27.174 2.60e-10 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03091 - - ccaj:109812699 175.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03091 3 44705870 44706181 Vimu3g03091 3 44705870 44706181 ECH