Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03090 ATGGCCAGAAGAGATCTTGAGGGTGGCGGTGGGAGAACCAAGAACAACAGAACAGAGGGAAACTACACTGCGCACGAGTCTTCTAATCTTTACGAAGCTGATACCCATTGGACATCATGGCTGGTTCCTATGTTTGTGGTTGCTAATATTGTTGTTTTTGTTATTTCCATGTACATCAACAATTGTCCCAAGAATAACCTCGGTCCCCAAGGTGGCTGCGTGGCCAAGTTCCTTGGAAGGTTCTCCTTCGAACCTATGCAGGAGAATCCGTTGCTTGGTCCTTCTTCTTCAACATTGACCAAGATGGGAGCCCTTCGGTGGGATAATGTTGTGAACGGGCATCAAGGATGGAGACTTGTCACTTGCATTTGGTTACACGCTGGGATTATTCATTTGCTTGCTAACATGTTGAGTCTGGTATTCATTGGGATTCGTCTGGAACAGCAATTCGGGTTTGTGAGGATTGGAGTTATATACCTGGTGTCTGGGTTTGGTGGAAGTGTTCTGTCATGTCTGTTTATCAGAGACCACACCTCGGTGGGTGCTTCTGGTGCCCTTTTTGGACTTCTTGGCGCAATGCTATCTGAACTTATCACAAACTGGACTATATATTCCAACAAAGCAATGGCATTACTCACCCTTCTAGTGATCATTGTGATCAACCTTGGCATTGGCATTTTGCCACACGTGGATAACTTTGCTCACATTGGAGGATTCTTGGTGGGATTTCTCCTTGGTTTTATTTTGTTGCCTCGTCCTCAGTTTGGATGGTTAGAGCAGCGTCGACTTCCTGCAGGTGTTCGTTTGAAGTCTAAGTACAAAGCTTACCAATATGTTCTATGGGTAGTGTCTCTTGTTCTGTTGACTGCAGGGTTAACAATTGCATTGGTGATGCTATTCCGGGGTGAGAAAGGGTATGATCACTGCCATTGGTGTCGGTACCTAACATGTGTCCCGACCTCTAAATGGGAATGCAGCAATGGCAGTTAA 990 0.4566 MARRDLEGGGGRTKNNRTEGNYTAHESSNLYEADTHWTSWLVPMFVVANIVVFVISMYINNCPKNNLGPQGGCVAKFLGRFSFEPMQENPLLGPSSSTLTKMGALRWDNVVNGHQGWRLVTCIWLHAGIIHLLANMLSLVFIGIRLEQQFGFVRIGVIYLVSGFGGSVLSCLFIRDHTSVGASGALFGLLGAMLSELITNWTIYSNKAMALLTLLVIIVINLGIGILPHVDNFAHIGGFLVGFLLGFILLPRPQFGWLEQRRLPAGVRLKSKYKAYQYVLWVVSLVLLTAGLTIALVMLFRGEKGYDHCHWCRYLTCVPTSKWECSNGS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03090 329 PANTHER RHOMBOID-RELATED 14 325 IPR002610 GO:0004252|GO:0006508|GO:0016020
Vimu3g03090 329 MobiDBLite consensus disorder prediction 1 22 - -
Vimu3g03090 329 Pfam Rhomboid family 112 253 IPR022764 GO:0004252|GO:0016020
Vimu3g03090 329 SUPERFAMILY Rhomboid-like 37 254 IPR035952 -
Vimu3g03090 329 Gene3D - 36 252 IPR035952 -
Vimu3g03090 329 FunFam RHOMBOID-like protein 35 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03090 Vimu-Chr3 44701819 44704784 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03090 - - gmx:100784224 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03090 3 44701819 44704784 Vimu3g03090 3 44701819 44704784 ECH