Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03084 ATGGTGGAGTTGGTGTTGTTGTACAAGAACCCATTGCTCCACGCATCACTCTCCCTGATCCTCGTCTTCACCTTCGCCTTCTTCAAAATCCCCCTCCTTTTCCTTCACGCTCTCCAGACCTACATTCATCCCGATTCCCAACCCCAATCCAATGGCCTCCGAGCCGCCATCCGTCGCCCCGGCATCGACGGCTACCAGCCCCTCTCCTCCAAAACCGCCGCCGAACTCAAGAAGAGGAACAAATCCAACAAGGACAAGCCCGATTTTGACGAAAACAATGCCCAGATCTTCAGACTCACGCTCGACCATGCGCACCTCCAGTCCCGACTCTTCGTCGATCAGTACTGCGTTGCTTTCACTCTCTCCTTCGCTGCCCTTTTCTCCCTCTTGCTCCACAACTTTCTCCAACCGCCCCCGAATAATGGGTTCTTCGTCAACGGGGTTTTCGTTCCCATTCTTTTATCAATTTTGAGTCTTTACATGTGGGGGACGCTGCTCATCAAGGTCACGTTCGAGAGATCCGCGTCCAGGAGGTCCGACAAGCAATTGAGCATTTTTTTTATGGTTTTGGGGCTTTCCTTTGGGCTTTTGTTTGTTCCTGAGGGCGTCTCTTCGGTTTTGGAGTTCCATTTTGAGGCTCCTATCGATGGGTTTTTGAGGGTTTTCGTTGCTGCATTGATGGGGTTCCTTGCGGGGTGTTTGTTCATTCCTGCTTCTAGAAGTGCTCGTTGTTTTTGGCTTGGGACTGATCAGATACGTTGCAATTTGTCGATGATAACATGTGGGTGGTTTACTCGTGCGATCCTTTATGCAAATCAGGTGTTAGTTATATTTGTAGCTCTGTTGTGGATAACCCCCTTGGCTGAGATTTTTGTGAATAGTGGAGATGGTGCGGCAAAAAGTGGATTTGGCAATGCGGAGAAATTGGTGGGGAAAATGGGGTTCTTGCCTTCTGATTTTGGTACCTTTAGGAAGTGGTGCTTGTTGGGGTCTGGTTTGTTGCAGATTGTTGCTTTGAGGCCTAACCTGCAGATGTATCTGAATGAAGCTTTGTTGTCTTGGTACCAAAGGCTTCATGCTAGCAAGGTTCCTGACTTGGATTATAGTAGGGCAAAGATGTTTCTGCATAATCACTACTTGTGCCTTGTGGTTTTGCAGTTTCTTGCCCCTCCTGTGCTGGTGCTTATCTTTCTTGGCTTGTCACTTATTGATGGTGGTTCCTTTGGAAATCTTGCGATGTTGAGTGATTTACTGCCCAGGTTTGCTTTCATCAGGGATGTGACTTTGTTTTTGGCTTGGTGGGTAACCTTCCTCTGGGCACTGTTCTCCTCGGCGATCCTTATGCTACATCGCCACTGTGTTTTATATGTTTCTTGA 1377 0.4822 MVELVLLYKNPLLHASLSLILVFTFAFFKIPLLFLHALQTYIHPDSQPQSNGLRAAIRRPGIDGYQPLSSKTAAELKKRNKSNKDKPDFDENNAQIFRLTLDHAHLQSRLFVDQYCVAFTLSFAALFSLLLHNFLQPPPNNGFFVNGVFVPILLSILSLYMWGTLLIKVTFERSASRRSDKQLSIFFMVLGLSFGLLFVPEGVSSVLEFHFEAPIDGFLRVFVAALMGFLAGCLFIPASRSARCFWLGTDQIRCNLSMITCGWFTRAILYANQVLVIFVALLWITPLAEIFVNSGDGAAKSGFGNAEKLVGKMGFLPSDFGTFRKWCLLGSGLLQIVALRPNLQMYLNEALLSWYQRLHASKVPDLDYSRAKMFLHNHYLCLVVLQFLAPPVLVLIFLGLSLIDGGSFGNLAMLSDLLPRFAFIRDVTLFLAWWVTFLWALFSSAILMLHRHCVLYVS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03084 458 PANTHER RE42071P 12 455 IPR019395 -
Vimu3g03084 458 Pfam Predicted transmembrane protein 161AB 218 397 IPR019395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03084 Vimu-Chr3 44636361 44640740 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03084 - - gmx:100793355 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03084 3 44636361 44640740 Vimu3g03084 3 44636361 44640740 ECH