Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03079 ATGTCTGTGCAACTGTGGGAGACCTTCAAGGAGGCCATAGTGCTCTACACTGGCCTAACTCCTTCCACCTTCTTCACGCTGCTCGCCCTAATTCTGGCCGCTTACTACGTCGTTTTGGGTTTCTTTGGGGGGCAGCCGGAGCGGCCCCGCCCCCGCCACACCGAGGAGGAGGAGATGCCGCCTGTGCGGCCGCCGGTCCAGCTCGGTGAGATCACGGCTGAGGAGCTCAAAGCCTACGACGGCACCGATACGGGTAAACCATTGCTCATGGCCATCAAGGGACAGATCTACGATGTCTCCCAGAGCAGGATGTTTTATGGACCTGGTGGACCTTATGCTCTATTTGCTGGAAAGGATGCCAGCAGGGCTTTAGCTAAGATGTCTTTTGAAGAGAAAGATTTGACTGGGGATATTTCTGGCCTTGGCCCATTTGAGCTTGATGCTTTACAAGATTGGGAATATAAGTTCATGAGCAAGTATGTAAAGGTTGGAACTGTGAAAAGCGAACTTCCTGTGACTGAATCAGAGTCCACCGCAGAACCATCAGAAACTACTTCCCGTGATATTGATACTGCTTCTGCTGTCAAGCCCAATGAAGATGGCAAATCAGAAATTGGTGCTGTTAAAAGTGAAGAAACCCCTTCAAACATTGATGCAGAAAAAGAGAACATTGATCCAGGAAAAGAAGAGTGA 693 0.5007 MSVQLWETFKEAIVLYTGLTPSTFFTLLALILAAYYVVLGFFGGQPERPRPRHTEEEEMPPVRPPVQLGEITAEELKAYDGTDTGKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELDALQDWEYKFMSKYVKVGTVKSELPVTESESTAEPSETTSRDIDTASAVKPNEDGKSEIGAVKSEETPSNIDAEKENIDPGKEE 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03079 230 MobiDBLite consensus disorder prediction 214 230 - -
Vimu3g03079 230 MobiDBLite consensus disorder prediction 169 230 - -
Vimu3g03079 230 FunFam Membrane steroid-binding protein 1 69 167 - -
Vimu3g03079 230 Gene3D - 69 167 IPR036400 -
Vimu3g03079 230 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 63 167 IPR036400 -
Vimu3g03079 230 SMART Cyt_b5_2 71 167 IPR001199 -
Vimu3g03079 230 MobiDBLite consensus disorder prediction 193 207 - -
Vimu3g03079 230 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 22 179 - -
Vimu3g03079 230 MobiDBLite consensus disorder prediction 170 192 - -
Vimu3g03079 230 Pfam Cytochrome b5-like Heme/Steroid binding domain 72 166 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03079 Vimu-Chr3 44612540 44614501 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03079 K17278 - gmx:100791779 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02036 8 26369646 26372959 Vimu3g03079 3 44612540 44614501 PCT