Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03068 ATGGAGGCTCAGCAGAAGGTGGTATTAAAGGTCCTTACTATGATAGATGAAAAAACAAAGAAGAAAGCAATAGAAGCAGCTGCAGATATCTATGGGGTTGATTCGATAGCTGCAGATGTGAAGGAACAGAAGTTGATAGTGGTTGGCGAAATGGATGCAGTGGCGGTGGTGAAGAAGCTGAAGAAAGTAGGGAAGGTAGATATAATATCGGTTGGACCTGCCAAGGAAGAGAAGAAAGAAGAAAAGAAAGAGGAAAAGAAAGAGGAAAAGAATGAAGAGAAGCCCGAAGAGAAACCGGAAGAGAAAAAATAA 312 0.4135 MEAQQKVVLKVLTMIDEKTKKKAIEAAADIYGVDSIAADVKEQKLIVVGEMDAVAVVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKNEEKPEEKPEEKK 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03068 103 ProSiteProfiles Heavy-metal-associated domain profile. 5 68 IPR006121 GO:0046872
Vimu3g03068 103 MobiDBLite consensus disorder prediction 74 103 - -
Vimu3g03068 103 Gene3D - 1 77 - -
Vimu3g03068 103 SUPERFAMILY HMA, heavy metal-associated domain 4 65 IPR036163 GO:0046872
Vimu3g03068 103 Coils Coil 72 94 - -
Vimu3g03068 103 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 5 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03068 Vimu-Chr3 44503068 44503662 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03068 - - pvu:PHAVU_007G070000g 114.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03068 3 44503068 44503662 Vimu3g03068 3 44503068 44503662 ECH