Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03060 GCCAACGCGGCATCTGGAATGGCTGTTCTTGACGAATGTAAATTAAAGTTCCTGGAGCTAAAGGCAAAGAGGAACTACCGTTTCATTGTGTTTAAGATTGAGAACTACGAAGTGATAGTGGAGAAACTTGGAAGCCCAGAAGAAACCTATGAGGACTTCACTGCATGTCTGCCTGCCAATGAGTGCCGATACGCTGTCTTTGATTTTGATTTCACAACAAATGAAAACTGCCAGAAAAGCAAGATTTTCTTCATTGCATGGGCTCCGGATACATCAAAGGTGAGAGAGAAGATGGTGTATGCCAGCTCCAAGGACAGATTCAAGAGGGAACTTGATGGCATTCAGGTTGAGTTGCAAGCAACGGATCCCAGTGAGATGAGCTTTGATATCATAAAAGCAAGGGCAATATAA 411 0.4355 ANAASGMAVLDECKLKFLELKAKRNYRFIVFKIENYEVIVEKLGSPEETYEDFTACLPANECRYAVFDFDFTTNENCQKSKIFFIAWAPDTSKVREKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAI 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03060 136 CDD ADF_cofilin_like 5 135 IPR017904 GO:0015629|GO:0030042
Vimu3g03060 136 ProSiteProfiles ADF-H domain profile. 4 136 IPR002108 GO:0003779
Vimu3g03060 136 PANTHER COFILIN-RELATED 1 135 IPR017904 GO:0015629|GO:0030042
Vimu3g03060 136 SUPERFAMILY Actin depolymerizing proteins 2 134 - -
Vimu3g03060 136 Gene3D Severin 1 136 IPR029006 -
Vimu3g03060 136 FunFam Actin-depolymerizing factor 2 1 136 - -
Vimu3g03060 136 SMART adf_2 11 136 IPR002108 GO:0003779
Vimu3g03060 136 Pfam Cofilin/tropomyosin-type actin-binding protein 13 133 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03060 Vimu-Chr3 44434999 44435670 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03060 K05765 - ahf:112779196 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03060 3 44434999 44435670 Vimu3g03060 3 44434999 44435670 ECH