Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03041 ATGAATGCAGATTATGATGTTCACAGATTCAGAGTTAAGACTCAGTACTTGGTGTTGTTTGATAACATAATCCACCGATTGAGATTTTCCAAATTCTTGGAGACTGTGTCGCGGAAGCTTGATAAAGAATGTGTGGAACTTCTTGATGGTTTGCTTCGCGATGGTAGGCTTACCCTGAAACAAATGGTTGACAGAGCAAGTCAAGGGAAAGGCAAGTGTTTTATGATGCACTTTATAGCTCGACTTGTCGAACGCTGCCCTGTCCCTGAGCCAGTTGTTTCTACCTCATTTAAAGAAACTACTACTAGGAAGCGGGGTGCTAAGTCTGCCAAGGTCAATTTCTTTAGGTTGTGTGATCTTTGGTTAATGGTTTGGGGTGAGAGGCATTTGCTGTCTATTGGTATATTTGAAGCACCCGAGACACTAGAGCAACGTGTTGTAGAAGCAGCAGTGCCTGGGGATGCAATCAGATTTTCATTCACCGCGGATATGAAATCTAATGTTGACAGAGAAACAAATTCAGATGATGATGAAATTGGTAGCGTTCAACAGAATGAGGGTAGGACTATTGTCATCTTTTGTGAAAAAGAGGAGGAAATTCTTTGGCGTGCCAATTTTGAGGAGTTTATTCGTCATCTTAGACATAAGGCATTGATTGAGAATATAAGAACTCAGCATGATGATGGAACTGCTACTGTCTTAAGTGCAGTATTGGAGGCAACAAAAACTGATTTTGGTGGAAGTAATGAGGCCATAGATAGATGGATGGATGAACTGATGGATAGAGGCATATGGCCTAACCTCTTTAAAGGGGTTTCTCTTGTTCCGTTTGCTCCCTCCCTCTAG 846 0.4184 MNADYDVHRFRVKTQYLVLFDNIIHRLRFSKFLETVSRKLDKECVELLDGLLRDGRLTLKQMVDRASQGKGKCFMMHFIARLVERCPVPEPVVSTSFKETTTRKRGAKSAKVNFFRLCDLWLMVWGERHLLSIGIFEAPETLEQRVVEAAVPGDAIRFSFTADMKSNVDRETNSDDDEIGSVQQNEGRTIVIFCEKEEEILWRANFEEFIRHLRHKALIENIRTQHDDGTATVLSAVLEATKTDFGGSNEAIDRWMDELMDRGIWPNLFKGVSLVPFAPSL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03041 281 Pfam RNA polymerase III subunit RPC82 196 243 IPR008806 GO:0003677|GO:0006351
Vimu3g03041 281 Gene3D - 20 96 IPR036388 -
Vimu3g03041 281 PANTHER RNA POLYMERASE III DNA DIRECTED -RELATED 11 243 IPR039748 GO:0003697|GO:0005666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03041 K03023 - gmx:100784750 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03041 3 44274503 44277535 Vimu3g03041 3 44274503 44277535 ECH