Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03032 ATGGAATCCCTTTGGAAACTTTTGTATTTGCTCGAGCCTGCACCTGTGACCCTTATCACTACAGCAGTGGCTGTGACATTTGGATCTGCGTTTCGAGCTCTAAATTATGGCAAGGAAATGGAGCGTAATCGTGACTTATCCGAAGCATCCATTACATTGGATAGGTCACAAGCCTTGATGATCCCTGTCATGAGCTCTTTTAGCTTGCTTTTGATGTTCTACTTGTTCTCATCTGTCTCGCAGCTTCTCACTGCATTCACTGCCATTGCGTCCGCTTCTTCCCTTTTCTTCTGTTTGTCTCCTTATGTTGCCTATCTAAAGACACAGTTTGGTTTAGCTGATCCATTTGTTTCACGATGTTGCTCAAAATCTTTTACACGACTCCAAGCTATACTGTTGGTAGTTTGCTGTTTCATAGTCGCGTCTTGGCTTGTTTCTGGTCATTGGATACTGAATAATTTATTGGGCATATCTATATGCATTGCATTTGTAAGCCATGTTCGTCTCCCAAATATCAAGATTTGTGCAATGCTCCTTCTTTGTCTATTCGTATATGACATTTTTTGGGTTTTCTTCTCCGAAAGATTTTTTGGTGCAAATGTCATGGTATCGGTAGCAACGCAGCAAGCATCAAATCCCGTGCACACAGTTGCTAATAGTTTAAGCCTTCCTGGGTTGCAACTAATAACTAAGAAGTTAGAGTTGCCTGTAAAGATTGTTTTTCCAAGAAATTTGCTGGGCGGTGTTGTTCCTGGAGAGAATGCGACAGACTTCATGATGCTTGGTTTAGGAGACATGGCTATCCCAGGAATGCTTCTGGCTTTAGTCCTCTGCTTTGATTATCGCAAGAGCAGGGACATTGTAAATCTCTTTGAGTTACATTCCTCAAAGGGGCACAAGTACATATGGTATGCACTACCTGGGTATGCCATTGGTTTGGTAACTGCTTTGGCTGCTGGTGTCTTGACTCACTCACCTCAACCTGCACTTCTTTATCTGGTGCCTTCTACTTTGGGACCTGTGATTGTGATCTCTTGGATGAAAAGAGAATTACTTGAGCTGTGGGAAGGAAACATGCCGAATCTCAATGATAAGGATCGCGAAATAGAAGTTTAG 1116 0.4247 MESLWKLLYLLEPAPVTLITTAVAVTFGSAFRALNYGKEMERNRDLSEASITLDRSQALMIPVMSSFSLLLMFYLFSSVSQLLTAFTAIASASSLFFCLSPYVAYLKTQFGLADPFVSRCCSKSFTRLQAILLVVCCFIVASWLVSGHWILNNLLGISICIAFVSHVRLPNIKICAMLLLCLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIVFPRNLLGGVVPGENATDFMMLGLGDMAIPGMLLALVLCFDYRKSRDIVNLFELHSSKGHKYIWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIVISWMKRELLELWEGNMPNLNDKDREIEV 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03032 371 PANTHER SIGNAL PEPTIDE PEPTIDASE 11 361 IPR007369 GO:0004190|GO:0016020
Vimu3g03032 371 Pfam Signal peptide peptidase 49 358 IPR007369 GO:0004190|GO:0016020
Vimu3g03032 371 SMART psh_8 49 348 IPR006639 GO:0004190|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03032 Vimu-Chr3 44194326 44197504 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03032 K09598 - gmx:100794976 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03032 3 44194326 44197504 Vimu3g03032 3 44194326 44197504 ECH