Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03012 ATGTTCACTCCTCTGGGTCGAGGCCTTTTCTCGCCGTGGAGTGGTTTAAAGCATTTGGGCATCTCTGCTAAACCAAAACCTCTTCTTCACATAGCTAGAAAGGGAGGGTGTAAGGGTATGGTGGTTTACGCTTCTCTCTTTGGGGTTGGAGCTCCTGAAGCTTTGGTGATTGGGGTCGTTGCTTTGTTGGTTTTTGGTCCTAAAGGTCTCGCTGAGGTTGCTCGAACTCTGGGAAAAACATTGCGTGCGTTTCAACCCACCATTAGAGAGCTTCAGGACGTTTCAAGGGAATTTAAGACTACGCTTGAACGGGAGATTGGTCTTGATGACAATATAAGTCCAACGCAGAACAGATACAACTCTAATGCAAGCAATACCAGATCAACATCATCATCCACTGTTGACCCTAATGGAACGCCAGATCCTAAGAATGCATACAGCTCTGAGGAATATCTTAAGATTACAGAGGAACAACTGAAGGCATCCGCTGCACAACAGCAGGAGCAAACACCTCCCAAGGAACGCGAGGATGAGCCTCAAATCCAGCCACCTGCTAAGGAAACAGCCAGTACTGTGCCTCCACCGCAGAAGCCAGAAAGTGAGACGTTGCCTCTGGATTCATAG 624 0.4792 MFTPLGRGLFSPWSGLKHLGISAKPKPLLHIARKGGCKGMVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDDNISPTQNRYNSNASNTRSTSSSTVDPNGTPDPKNAYSSEEYLKITEEQLKASAAQQQEQTPPKEREDEPQIQPPAKETASTVPPPQKPESETLPLDS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03012 207 Gene3D - 46 94 - -
Vimu3g03012 207 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC 2 201 - -
Vimu3g03012 207 MobiDBLite consensus disorder prediction 110 144 - -
Vimu3g03012 207 MobiDBLite consensus disorder prediction 107 207 - -
Vimu3g03012 207 PRINTS Bacterial sec-independent translocation TatB protein signature 66 85 - -
Vimu3g03012 207 PRINTS Bacterial sec-independent translocation TatB protein signature 46 66 - -
Vimu3g03012 207 Pfam mttA/Hcf106 family 49 99 IPR003369 GO:0015031
Vimu3g03012 207 FunFam Sec-independent protein translocase protein TATB, chloroplastic 46 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03012 Vimu-Chr3 44081444 44084966 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03012 - - gmx:100799045 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03012 3 44081444 44084966 Vimu3g03012 3 44081444 44084966 ECH