Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03011 ATGGATTCGAGCGACAGTGGTCGCGGTTACTCCAAGCGCGAGAGGGATGACGAGGATTGGGAGTTCAGCGACAAGAGGAAAGATAGGTCTAGAAAGTTTGGGGGCAATGGGGACGAGGGAGAGGCTTCCGACGGAGGCGCCAGGAGAAAGCGCTCCAGCAGGACTGATAGCGACGATTACGATTCGCGCTCCAAGCAAGGGGCCAAGAAGAGGCAGGAGGAGAGCACGTTGGAGAAGTTGAGCAGTTGGTATGAGGATGGGGAATTGGACGAGAAGGCCGCGAGGAAGCGCGCCGGGGACGGCGATTTTCACGAGAGTGTGGTGAGTAAGGAGGATGGTGGCGGTGGTGGCCGGGAGAAGGTTGGGCATGAGGCCCGGAGTTCGAGGAGGAAATGGGACGAGGTTGATGCTAGTAGTGCGAGGAGGTCGCAGGATGAGAAAGGGGAATTCAGGAGTGGGAAACGCGATAGTTCTAGGGACAGGGAGAGGAGTGGATCTGCTAGGAGTGAGCATGGGGAAGGTAAAGCCTCTGGTGCTGATAGAGTTGTGAAGTCTAGCAGTAAGGAGGAGAGAAGGGGTGATTCCGAGAGAGGGAAGAGTAAGGGGAAGTCGGATTCGGTGGATGCTGGGCGCGAGGAGAGGGTTGAGAAGCCCAGGCATCATAGGGCCCCTGCTGGTTATGATGGGGCGGAAACCTGGGATAGGTCGTTGAATGTGGAGGAGGATGGGCATGTGCGGGTTAGGGATAAGAGTGCTAGGGAGAGTGGGAACACAAACAGGTCGAGGACACCTGAGAGGAGTGGAAAACGCCACCAAGATTTGGAAAACTCTGAGGTGGATTTTGAAAGAAGTGGTAGCTTTAAAAGGAAGGAGCAGGAGGGCGATGGCTTTAAGGATGATAGATCCAAAGGGAAAGACGATACATGGAATGACAGGAGGAAGGATCGGGAAAGTTCAAAAGAAAGTTGGAAGAGGAGGCAACCGAGTAATGCTGACAAAGAGAAAAACGAGGAGGGTGCTTTTGATGACAACAGAGATTGGGAGTTACCTAGACATGGTTATGAGAGGATGGACAATGAAAGGCCTCATGGACGGTTTGGAGGTAGAAAAGATGTGAGTAGGGGGGAAGCTGTTAAAACATCCACAAAGTTTGGGATTTCGAATGACAATTACGATGTGATAGAGATCCAGACCAAGTTTTATGACTATGGGAAATCAGAATCTCTGTCTAACCATACTAAGAGAAATGAAGCTCATCAGCAGTACAATGCGAAATCTGGTGTTAATGACGAAGACTGGGCATATCATCAAGATGAAAGAGGAAGGAAGAACGATTTATCTGGTGATGATCTAAAGGAGAGATACGCAGATGATGACTATGATTTTTATGGGGGAAGAGGAAGAGGTCAGAAAGGTGGTGTATCTGCCCGCACTACTGGCGGCCAAAGTTCTAGTAGTGGTGGCTCACAGCCTCAATATGGAAATCCGGAGTCTGGTTCCTTTAACAGAGCTGGTCCACAAGGGATGAAAGGTAACAGGGTTGGTAGAGGAGGAAGAATTAGGCCTACTGGGAGAGACAATCAGCAGGTTGGAATGCCATTGCCAATGATGGGATCGCCCTATGGACCTCTTGCAATGCCTCCACCTGGACCAATGCAACCTCTTTCACATGGTATGTCACCTGCTCCCGGTCCACCAATGTCCCCTGGAGTCTTCCTTTCACCATTTACTCCTGCTGTTTGGCCTGGAGCTCGAGGTGTTGATATGAATATTATAGGTGTACCACCTGTGTCTCCTGTCCCCCCGGGTCCTTCAGGTCCAAGATTCAATGCTGCTAATTTAGGGAACCCACCAAATCCGGCAATGTATTATAACCAATCAGGTCCTGGAAGGGGAATACCCCCAAACATCTCTACTTCTGGTTTTAATCCTCCAGGATCAATGGGTCGAGGAGCCCCACCTGACAAAGCTCCAGGGGGATGGGCTCCTCCTAAAAGTAGTGGAACTCTTGGTAAAGCTCCTTCCAGAGGTGAACAGAATGATTATTCTCAAAACTTTGTTGACACTGGTATGCGGCCACAGAATTTCATTAGGGAGCTTGAGCTGACAAATGTTGTGGAGGATTATCCTAAGCTTAGAGAGCTTATACAGAAAAAGGATGAGATTGTTGCAAAATCTGCATCTGCTCCTATGTATTATAAGTGTGATTTGAAAGAGTTTGAACTATCTCATGAGTTCTTTGGTACAAAGTTTGATGTCATTCTTGTGGATCCCCCATGGGAGGAGTATGTGCACCGTGCCCCTGGTGTCGCTGATCACATGGAGTATTGGACATTTGAAGAAATAATGAATCTCAAGATCGAGGCTATAGCAGATACGCCTTCTTTCATTTTCCTTTGGGTGGGTGACGGTGTAGGTCTTGAACAAGGTCGTCAATGTCTAAAGAAGTGGGGATTTCGTAGGTGTGAAGATATATGTTGGGTAAAGACAAACAAAAGTAATGCAACTCCAGGATTACGGCATGACGCACATACTTTATTTCAACATTCAAAGGAACACTGCTTAATGGGCATAAAAGGAACTGTTCGTAGAAGCACTGATGGCCATATAATTCATGCCAATATTGACACGGATGTCATTATAGCTGAAGAACCTCCGTATGGTTGGTTTGAGTGTGGACCATATCGAAATACTGCCCTTGCTCATGTTGAAGTAGATATTAGGCCTTGTCTCAACATGGGTTCAACACAAAAGCCTGAAGATATGTACAGGATTATTGAGCACTTTGCCCTTGGAAGGAGGAGACTAGAACTATTTGGTGAAGACCACAATATCCGGGCTGGCTGGCTGACTGTTGGCAAAGAGTTGTCGTCTTCAAACTTTAATAAAGAGGCATACGTGAAGAGCTTTTCTGACAAAGATGGGAAAGTTTGGCAAGGAGGTGGGGGAAGAAATCCACCTCCGGAGGCACCTCATCTGGTGGTGACTACTCCTGATATAGAGGCTCTGAGGCCGAAGTCACCAATGAAGAACCAACAACAAATGCAGCAGCAGAATTCAGTATCCATTTCTTTGACGACAGGTGGGTCAAACAGAAGGACTGCTGGGAATTCACCGCAGAACCCACCTGCACTTGGTGTCAACCAAGATGCATCAAACTCAAACCCTTCTACTCCAGCTCCTTGGGGTTCACCTTTGGAGGGCTTCAAGGGACGTGAAGGCTCTGTATTGCCCGCAGATGATAAAGTAATGGATATGTACGGGTTTCATGGACCACCATCTGCGGGCTATCTAGATTTTGAATCTTACAGACAAATGAATATGTTGTAG 3330 0.4805 MDSSDSGRGYSKRERDDEDWEFSDKRKDRSRKFGGNGDEGEASDGGARRKRSSRTDSDDYDSRSKQGAKKRQEESTLEKLSSWYEDGELDEKAARKRAGDGDFHESVVSKEDGGGGGREKVGHEARSSRRKWDEVDASSARRSQDEKGEFRSGKRDSSRDRERSGSARSEHGEGKASGADRVVKSSSKEERRGDSERGKSKGKSDSVDAGREERVEKPRHHRAPAGYDGAETWDRSLNVEEDGHVRVRDKSARESGNTNRSRTPERSGKRHQDLENSEVDFERSGSFKRKEQEGDGFKDDRSKGKDDTWNDRRKDRESSKESWKRRQPSNADKEKNEEGAFDDNRDWELPRHGYERMDNERPHGRFGGRKDVSRGEAVKTSTKFGISNDNYDVIEIQTKFYDYGKSESLSNHTKRNEAHQQYNAKSGVNDEDWAYHQDERGRKNDLSGDDLKERYADDDYDFYGGRGRGQKGGVSARTTGGQSSSSGGSQPQYGNPESGSFNRAGPQGMKGNRVGRGGRIRPTGRDNQQVGMPLPMMGSPYGPLAMPPPGPMQPLSHGMSPAPGPPMSPGVFLSPFTPAVWPGARGVDMNIIGVPPVSPVPPGPSGPRFNAANLGNPPNPAMYYNQSGPGRGIPPNISTSGFNPPGSMGRGAPPDKAPGGWAPPKSSGTLGKAPSRGEQNDYSQNFVDTGMRPQNFIRELELTNVVEDYPKLRELIQKKDEIVAKSASAPMYYKCDLKEFELSHEFFGTKFDVILVDPPWEEYVHRAPGVADHMEYWTFEEIMNLKIEAIADTPSFIFLWVGDGVGLEQGRQCLKKWGFRRCEDICWVKTNKSNATPGLRHDAHTLFQHSKEHCLMGIKGTVRRSTDGHIIHANIDTDVIIAEEPPYGWFECGPYRNTALAHVEVDIRPCLNMGSTQKPEDMYRIIEHFALGRRRLELFGEDHNIRAGWLTVGKELSSSNFNKEAYVKSFSDKDGKVWQGGGGRNPPPEAPHLVVTTPDIEALRPKSPMKNQQQMQQQNSVSISLTTGGSNRRTAGNSPQNPPALGVNQDASNSNPSTPAPWGSPLEGFKGREGSVLPADDKVMDMYGFHGPPSAGYLDFESYRQMNML 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03011 1109 MobiDBLite consensus disorder prediction 407 534 - -
Vimu3g03011 1109 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 744 924 IPR029063 -
Vimu3g03011 1109 MobiDBLite consensus disorder prediction 1007 1061 - -
Vimu3g03011 1109 ProSitePatterns N-6 Adenine-specific DNA methylases signature. 754 760 IPR002052 GO:0003676|GO:0008168|GO:0032259
Vimu3g03011 1109 MobiDBLite consensus disorder prediction 631 645 - -
Vimu3g03011 1109 ProSiteProfiles mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase-like (MT-A70-like) family profile. 525 1092 - -
Vimu3g03011 1109 MobiDBLite consensus disorder prediction 1006 1075 - -
Vimu3g03011 1109 PANTHER N6-ADENOSINE-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT 40 1072 IPR045123 -
Vimu3g03011 1109 MobiDBLite consensus disorder prediction 610 688 - -
Vimu3g03011 1109 Pfam MT-A70 912 955 IPR007757 -
Vimu3g03011 1109 Pfam MT-A70 751 884 IPR007757 -
Vimu3g03011 1109 ProSiteProfiles MT-A70-like family profile. 710 975 IPR007757 -
Vimu3g03011 1109 MobiDBLite consensus disorder prediction 431 465 - -
Vimu3g03011 1109 MobiDBLite consensus disorder prediction 1 377 - -
Vimu3g03011 1109 MobiDBLite consensus disorder prediction 475 502 - -
Vimu3g03011 1109 MobiDBLite consensus disorder prediction 672 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03011 Vimu-Chr3 44072805 44080170 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03011 K23960 - gmx:100798100 1919.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03011 3 44072805 44080170 Vimu3g03011 3 44072805 44080170 ECH