Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02997 ATGGTATCTAAAAACTCCAACCCTTCAGAGGCTTTCTACATGGACCCTTCTGCTGTGTCGCTCCCCGGAATACTCCCTTTTGCCGCCGCTACCGGTGCCGATTCCCTTGAGGACCCTGCTAAGAAGACTCGCAAACCTTACACCATCACCAAGTCTAGGGAGAGTTGGACCGAACCCGAGCACGACAAGTTCCTCGAAGCTCTGCAGCTCTCAATTGAGACATGGATTTTAGCGGTATATCATATAAGAGGTTTCAAATTGTTTCAGGGGTATGTGCTTATGATTAGATTTGACCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACAGTTATCCAGATACGAAGCCATGCTCAGAAATACTTTCTAAAAGTTCAGAAGAATGGGACAAGTGAACATCTTCCTCCACCCAGACCAAAAAGAAAAGCTGCTCATCCATACCCTCAGAAAGCTTCAAAAAATGTTCCAGTGCTCTCACAAGTATCAGGATCCTTTCAATCATCATCGGCTTTGCTTGAACCAGGTTACATAATGAAGCGTGATTCTTCAGCAATGCTTAAAACTCCTATTATTAAAGCTGCAGCGTCTTCCTGGTCAAACAATTCTCTGCAGAAAAGCACCAATCTATTGCATGGTACTAAACGCCGAACTTTCCGCCACAAAGTGAATAATTGTTGCAGTAACAGTGGAAGTCCTAGAGCACAGTTGGTTGGTGAATCTAATGGTCAAGGGAATAATATCCATCCATTGAGAATTCTTCCAGATTTTGGTCAAGTATACGGCTTCATTGGCAGTGTATTTGATCCAAATGTAACTGGACATCTGCAGAAACTGAAACGAATGGATCCTATAGATGTTGAGACAGTGCTATTGTTGATGAGAAACCTGTCTATCAATTTAGTAAGCCCAGATTTTGAGGACCATAGAAGGCTGCTTGCATCATATGAGGTGGAACCTGAGTCAGATAACTATTATATCAACGCAGATAGAAACATGCTTGAAGGGCAGTTCAAGAGTGCTACTTAG 1032 0.4273 MVSKNSNPSEAFYMDPSAVSLPGILPFAAATGADSLEDPAKKTRKPYTITKSRESWTEPEHDKFLEALQLSIETWILAVYHIRGFKLFQGYVLMIRFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHLPPPRPKRKAAHPYPQKASKNVPVLSQVSGSFQSSSALLEPGYIMKRDSSAMLKTPIIKAAASSWSNNSLQKSTNLLHGTKRRTFRHKVNNCCSNSGSPRAQLVGESNGQGNNIHPLRILPDFGQVYGFIGSVFDPNVTGHLQKLKRMDPIDVETVLLLMRNLSINLVSPDFEDHRRLLASYEVEPESDNYYINADRNMLEGQFKSAT 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02997 343 SMART sant 52 126 IPR001005 -
Vimu3g02997 343 MobiDBLite consensus disorder prediction 129 151 - -
Vimu3g02997 343 PANTHER SWI/SNF COMPLEX-RELATED 36 303 - -
Vimu3g02997 343 CDD SANT 55 124 IPR001005 -
Vimu3g02997 343 Pfam Myb-like DNA-binding domain 53 124 IPR001005 -
Vimu3g02997 343 Gene3D - 56 129 - -
Vimu3g02997 343 SUPERFAMILY Homeodomain-like 47 129 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02997 Vimu-Chr3 43983840 43987433 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02997 - - gmx:100794389 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02997 3 43983840 43987433 Vimu3g02997 3 43983840 43987433 ECH