Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02968 ATGGACACCGAAGGCTTATCAGTAATCTGCTCCGGCCTCGGAACCGTCGAAGAGGACAATGAAGGCAATCGAGTTGGCTTTACCAAAGGCGAATACTGTCTTGATAACCTGAAAGATTTGCTGCGGTTTCTTAGGCGCGACGATCCCCAAACGCGCGATGTATTCAAGCAAGTTTGCAAATGGAACATAGTTTCTAAGTATTTGATACCCACCATCGAAGTTTATCACGAAGATCGCAACTTGCTTCTGAATTCAGTAAAGGTACTGGTGTTTCTTACGATGCCGGTTGAGCCTTCTTCCACGGATATACCTCAACAGTTGGAGTATCTGTGGGGCTTGAAGTCTGCTGTGACGAACAGTGACGTCGCTGCAGTGATAGTTTCTTTTCTAGAGAGGCCGCTTGAGAATCTTGAACGCGACGCATTTAGCGAGGATGATTGGAAACTAGTACAGCTTGTGCTTACATTATTTAGAAATATTCTTGCTGTTCAAGAAATTCCGTTGCACCAGAAGGCAGGGGGACTAGCGTGTCAGTTTCTATCTCTGAGAGATCGGTTTCTGGAGCTTTTATTTCGCGAGAATGTAATGGATATAATATTGGTTATTACTCAATATGTTGGTGGTTCTAATGCTTATCTCCGTCAAGATAACTTGCTTCTACTAGAAATTTTCCATTACATTTTCATGGGTCAGGACCCGGAGTTAATTATTAGGGCACATTCGAAGGGATCAAAGGCAGATGAAGATCCCCAGGCTTCTCTTAATAGTCTCCACCAGTTCATCTTGGAGGAGGAAAAGAAGAGAAAAAATAGTAGTAAGATAAAAAATCTTAGTAGACATTCTCAATTTAGTGGAACATTTTCTCGGCTTACAATGGATGGTTCTAAGGCAGTGGTTAAAGGAAATCCTAATTCTTCTCATAATGTGCTACTTAAAGCACACAATGTCACTCGGGGTCCTACTAAAAGAATTGCGTGGGATCATCCAAGGTTGCCTTCAACAAAGGATAAGATATTGGATTTGCTTCACGGATTTGTGAATCAGTTGCTTTCTGGGGGATATAATGTTTTGATGCAATCCATCCGTGAAGATATAGCAAAGGAACATCCCTCAATTCAAAGAAGTGATGTTGTTGTTTTCTTTCAAGTGGCTGAATTTGTCATTGCGTTTCAGTTTTACAAATGTTCAGCTTCTAAGGAGGGAGGAGACACATTTGAGAATTTTGGTGATAAAGATGCAGTTACCTCAGATTTCAGTGGTCAAATTTGTGGTCCAATTGCAGCATCCTTGAATGAGGCAATGTTTCAAATGGTCATTTCACAGTGGCGGAATGCCTATGATGGTCTAAAGGAAACAAATGACCACCAGTTTCTATCTGCAGCTGGTTCTCTTTTGAAAAGCATGATTCGGATGCTGGATTTGATACTTAAATTGTTGCCTGAAGACTCAAAGGAGCCACAAACAGCTCGTATCCTTCTGTACAAGTTAACTTATGATCAGACCGAGGAAGGGATGACACAATTCCTATTGAATTTGATGAAAAACTTTGACACCCACAAGCAACCAAAAAGTGATCTTTCAGATTTGGTAGAAATCATTCATAAGGTTGTAAAGCTGATGGATAGTCTTCAGTCTCGAGGAACATTGAGGGTGTCGAGAAAATCAAGGAAAGTGAAAAAGAAAAAAATGCCAGAAGGAACGGAATCAGGGGACAAACTGACTGGAGATAATTCTTGCATTCAAAATGAAACGGGCATCTCAACTGTCAATCAATCAGCAGAAAATGAGCTACTGCAGGAATGTCTACCAAATCCAAATCCAAATCCAAATCCAAATCCTACCGGGGAGGATGTTGCCCTTGATGATAATGAACATGAAAAACGTGTTCAAGAAGATGAGAACCCCCGAGTTGAGTTGGAACCAATGGAAGCCACGTATCCTGAACATGTTAATGAGGACATGTTGGATGGTACTAATGATTATTCTGAAGATGAGCAACTAAATGCAATTAATGAAGTTGATTTCAAGGTTTCAACGCTTGTCTCTGCCTTTGCAAATCATAGTATCATTCAGAAATTGTGCTGGTTGCTCAAGTTTTATAAGAGCAATTCCCTTGCTACAAATCATTACATAATAAGCATGTTGCGGAGAATAAGTGATGATCTTGAACTCCAACCTATGTTTTACCAGTTGTCGCTGCTCACAACATTTTATGACATCCTGGTTGAACAAAAGTCATCTCCCTGCCAGGAATATGCAGATATAGTTGATTTCCTGAATTGTTTGGTCAGAAATATGCTAAAGAAAATGAAAAAACAACCCCTCTTGTTTGTAGAAGTCCTTTTCTGGAAGACTCGAAGGGAATGTCATTACTTGAATGCTGAATATTTGTTGAGCGAGCTTGGTCATTTGAAGAAAGAAAGTACCAAGTGGAATAACACTGCACAAGATGAAAAAGTTGGTCTATCCCCAGCGAAGGTGTGGACTCGTAGAAGCATAGCTGATGCACTTGGTGAGGATGAGGCTGATGTTTTGATTACTCATGACTCAGGATATCAAAAACTTGGTGAGGATGAGGCTGATGTTTTGATTACTCAAGACTCAGGATATCAAAATGGGGAGGAGCAATTAGTGGAAGATGATTCTCAAATAGTTCCACGGAAAAGGAAAAAACTTATTCTTGATGGCGATTTGGAAGGACAAGTTAAGAATCTCTATGAAAAATTCAAGGATGACCGACATTGCAGTCGGCGTATAGCTGAAGTGTTAGATCCAGATGGTAAAATTTCACCTGCTCAAATTTCCAATACGTTAAAAAGATTAGGTCTAACAGTTGCACGTAGGAGAAGGATTGGTGATAATAATGCTGAAGGACCTTTGTCTACTAGCCCCAATCAATTAGATGCTGACACAACAGTGGGAGATACCAATCATAAATCAGTGAATCTCGAAAGAAGCCAGTTAGTTCAACACCTGCAAAAAAAGAAGAGACTCCGTGCTTTCAATGAAGATCAGGAAGCTCTGTTAAAAGTTCTATATGAGCAATTCAAGGACCATAGAAGATGTAGTTACATGATAGCCAATGCACTTGATGAAGATGGTAAATTCACTCCTGCCCAAGTCTCTCGAAAACTTAAGCAGCTTGGTTTATCACTACCTCAGAAGAAGAGTTCTAGAGGCAAAAAGCACCTAAAGGGTGTAGATGTTATGGATAGTTCAAATGATAGGATGGATGAATCTGAAGATGAGACATTGGTATCATTGGTAAAAAGGAAGAAAGTCGACAATGACAATGTATCAAGGGGACAATCACATGGGCAAACCAACGAGGATAGATTGTCAACAGATGATTTGGATGACGAAACACTCAGCTCTGTTATCAAGAAGAAAATAAATAACAAGGTATCAGCTGAGAAATTGCTTGCACCTATCAGTGAGGATACATCATCAAGAGATGATTCGGATGACGAAACGCTCAGCTCTGTTATCAAGAAGAAAATAAATAGCAAGGTATCAGCTGAGAAATTGCTTGCACCTATCAGTGAGGATACACCGTCAAGAGAGGATTCTGATGATGAAATACTCGACTCTGTTCTCAAAAGAACTGGAAGATCCTTTCCTAAATCAAAGCAGGACGAGCTTGAAAATATCCAAGTTGATGATCACCTTAATGGAGGCATATCAGAGGTTATCAAAATGGAAGATGTTGATTCCATGAATTCCTCCCAAGTAGAATATCAGCAAATGGACGACTTAGCAGATTCAGAGGATGAAGTGAATGTCAGGGCATTTTCGGAGAATGTCAGATCCAGAAGGAAGCTTAGAATGGTGATTGATCCCGAGGACGATGACTGA 3855 0.4021 MDTEGLSVICSGLGTVEEDNEGNRVGFTKGEYCLDNLKDLLRFLRRDDPQTRDVFKQVCKWNIVSKYLIPTIEVYHEDRNLLLNSVKVLVFLTMPVEPSSTDIPQQLEYLWGLKSAVTNSDVAAVIVSFLERPLENLERDAFSEDDWKLVQLVLTLFRNILAVQEIPLHQKAGGLACQFLSLRDRFLELLFRENVMDIILVITQYVGGSNAYLRQDNLLLLEIFHYIFMGQDPELIIRAHSKGSKADEDPQASLNSLHQFILEEEKKRKNSSKIKNLSRHSQFSGTFSRLTMDGSKAVVKGNPNSSHNVLLKAHNVTRGPTKRIAWDHPRLPSTKDKILDLLHGFVNQLLSGGYNVLMQSIREDIAKEHPSIQRSDVVVFFQVAEFVIAFQFYKCSASKEGGDTFENFGDKDAVTSDFSGQICGPIAASLNEAMFQMVISQWRNAYDGLKETNDHQFLSAAGSLLKSMIRMLDLILKLLPEDSKEPQTARILLYKLTYDQTEEGMTQFLLNLMKNFDTHKQPKSDLSDLVEIIHKVVKLMDSLQSRGTLRVSRKSRKVKKKKMPEGTESGDKLTGDNSCIQNETGISTVNQSAENELLQECLPNPNPNPNPNPTGEDVALDDNEHEKRVQEDENPRVELEPMEATYPEHVNEDMLDGTNDYSEDEQLNAINEVDFKVSTLVSAFANHSIIQKLCWLLKFYKSNSLATNHYIISMLRRISDDLELQPMFYQLSLLTTFYDILVEQKSSPCQEYADIVDFLNCLVRNMLKKMKKQPLLFVEVLFWKTRRECHYLNAEYLLSELGHLKKESTKWNNTAQDEKVGLSPAKVWTRRSIADALGEDEADVLITHDSGYQKLGEDEADVLITQDSGYQNGEEQLVEDDSQIVPRKRKKLILDGDLEGQVKNLYEKFKDDRHCSRRIAEVLDPDGKISPAQISNTLKRLGLTVARRRRIGDNNAEGPLSTSPNQLDADTTVGDTNHKSVNLERSQLVQHLQKKKRLRAFNEDQEALLKVLYEQFKDHRRCSYMIANALDEDGKFTPAQVSRKLKQLGLSLPQKKSSRGKKHLKGVDVMDSSNDRMDESEDETLVSLVKRKKVDNDNVSRGQSHGQTNEDRLSTDDLDDETLSSVIKKKINNKVSAEKLLAPISEDTSSRDDSDDETLSSVIKKKINSKVSAEKLLAPISEDTPSREDSDDEILDSVLKRTGRSFPKSKQDELENIQVDDHLNGGISEVIKMEDVDSMNSSQVEYQQMDDLADSEDEVNVRAFSENVRSRRKLRMVIDPEDDD 1284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02968 1284 MobiDBLite consensus disorder prediction 956 971 - -
Vimu3g02968 1284 MobiDBLite consensus disorder prediction 1063 1099 - -
Vimu3g02968 1284 PANTHER TIMEOUT/TIMELESS-2 1 1284 IPR044998 -
Vimu3g02968 1284 MobiDBLite consensus disorder prediction 952 971 - -
Vimu3g02968 1284 MobiDBLite consensus disorder prediction 548 579 - -
Vimu3g02968 1284 MobiDBLite consensus disorder prediction 1049 1118 - -
Vimu3g02968 1284 Pfam Timeless protein 27 288 IPR006906 -
Vimu3g02968 1284 MobiDBLite consensus disorder prediction 599 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02968 Vimu-Chr3 43769262 43778956 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02968 K10997 - gmx:100796385 1911.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02968 3 43769262 43778956 Vimu3g02968 3 43769262 43778956 ECH