Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02916 ATGCTCAGTTACTTTGACATAAGCGCAGAGGCTTCACACATTTGCTGTAATCTTCTCAAAAGCATCAGCCAAGTCCTCTCTTATTATCAGTTCATTCAAAGAGTTCTGGACATTAAGGATGGTGACTCTTTCGAAACTTTTCAAGTAGTCATCTTTGAGCTAAACTCATTCACCTACTCAAATGACCCGTTTTCAAACCTTAAAACCGATGACTTCAAGCTCATCAATGATAAGCACTCATCAGTTTTGTGCCATCTAAAGTCAATGAGAAAAAGAGTGGGAAGGAAAATTAAGCTCATGAAGTATTTGATGAAGACATATTGGTTTTGTGTCACTGCAGCTTGTGCCTTAGTGGCAATCACAGCCATGGTTATAGCCACACATACTCTGACAGCAGTAATCTTGGGGCCAGCAATTCTCTGCTTCCCATTCAAGCATCTTAAGAGGGAGCTTAGAGACTGTAAAGTTTCAAGAAAAGGGTCTCTTGATAAAGTTTACGAGCAGCTTGACATAGCAGCGAAGGGGACTTACATATTGAATAGAGACTTTGACACGATGAGTAGACTTGTAGCTCGGCTTCGTGATGAAATTGAGCACAACAGAGAAATGGTGCAGTTCTGTTTGGACAGGAAAGAAGATAAATTATCATTTCAGGTTGTGAAGGAGCTTAAGAAAAGTGATATAGGATTCAGGAAACAAGTGGAAGAACTTGAAGAACATGTGTACTTGTGCCTTGTAACAATAAACCAGACAAGAGCCTTGGTCATTAAGGAAATGAAAAGATCAGTATGA 792 0.3965 MLSYFDISAEASHICCNLLKSISQVLSYYQFIQRVLDIKDGDSFETFQVVIFELNSFTYSNDPFSNLKTDDFKLINDKHSSVLCHLKSMRKRVGRKIKLMKYLMKTYWFCVTAACALVAITAMVIATHTLTAVILGPAILCFPFKHLKRELRDCKVSRKGSLDKVYEQLDIAAKGTYILNRDFDTMSRLVARLRDEIEHNREMVQFCLDRKEDKLSFQVVKELKKSDIGFRKQVEELEEHVYLCLVTINQTRALVIKEMKRSV 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02916 263 Pfam Protein of unknown function (DUF677) 41 257 IPR007749 -
Vimu3g02916 263 PANTHER UPF0496 PROTEIN 3-RELATED 2 260 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02916 Vimu-Chr3 43293752 43296143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02916 - - vun:114191405 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02916 3 43293752 43296143 Vimu3g02916 3 43293752 43296143 ECH
Vimu8g02636 8 36686304 36689313 Vimu3g02916 3 43293752 43296143 PCT