Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02846 ATGTGTATTATGTGCCATTATTGTGGTGCGGGCTTGTCAGAATCAAATTTTGACAATAAAAAAGAGGGTAATGAGAGTAGTCTAAAGTTCAATGCCAAAGTTTCCATTAGGCCTTGCAAATCCTGTGGAGAGAAGCTAGAGCGAGCAAATGCGAAGTGGCGTAGTAATAGTCCATATGTGACACCATATGTCAGTCCAACTACATCATTGCAAAGTACTGATAGCTGTGTCTCCACCTGCAGTGACTTTTCAGTTGATGTTAACTCATGTGACAGGAATAGTCAAGAAGAAAGTACAGTTGAAGGTGGTGTGGAAGATCTCGGTTATCAGGTGAATGGTTCACAAAAAGTGATGGAAAGCTATTCCGAAGAAAGCAATAACAACTATGAGGGTTACACAGTGAGAGATGTGGAAATTGCACAAGGGCATAACTTTCAAGAAGAAAAAGCTTATCATTCTGAAGACCCTATTGAATCCTCTGTCGAGGAAACTGAATATTCTCTTCCCGATGATCTGGAAGTCCAAACTTGGGAACCTCCTGAGCCAGAGAACCCACAGGATGACATAGACAATAGTGTGACCTGTAACGACGATGATGAAGACCACGGCATGGAGATTGCAAACTTGGGTGAGCCAATTTCTATCAATAGTTCCGAGGATGAATTAAGTGGGACCTATAGGTTCAAAGAGGAAAAACTAAGAGCAATGGAAGAAATGATGAATGGGAAATTCAAGGCACTTGTTGGTCAGCTTCTTAAATCTGTAGGAGTTTCCTCTTCGGACGAAGGTGATAAGTGTTGGGTGGACATAGTTACATCTTTATCATGGGAAGCCGCATCTTTTTTGAAGCCTGATGCAGTAGGAGGTAGTACAATGAATCCTGATGGATATGTTAAAGTAAAGTGCATTGCTGCTGGTTCTCGTGGCCAAAGTCAACTAATCAGAGGTTTGGTCTTCAAAAAACATGCTGCTCACAAGCATATGCCAACTAAGTATAAAAATCCTAGATTATTACTGATTAGTGGCGCGCTTGGTCATTCTATTGATGGCCTGTCCTCATTTGACTCCATGGACCAGGAGAAGGATGATCTGAAATCTAAAATGGATCGTATTGAAATGTGCCATCCAAATGTTATATTAGTGGAGAAAACTGTCTCTCGTGATGTACAAGAGTCAATTTTGGCAAAGGGAATGACACTTGTGTTTGATATGAAGCTTCACCGTCTGGAAAGAGTTGCACGTTGTACTGGTTCACCAATTTTATCATGTGATAATTTGAATGGTCAAAAGCTAAGACACTGTGATTTTGTTTATTTTGAGAAGTTTGTGGAGGAACATGATGGGGTTGGTGAAGGAGGAAAGAAGCCCACCAAGACTTTGATGTTCATTGAGGGCTGTCCTACACGTTTGGGCTGCACAGTATGCCATTATCTGTTGCTTGGAATCTCTGTTTTCTTATTTATTCTAGTTCTTAATCTTCCAAACTAA 1488 0.4079 MCIMCHYCGAGLSESNFDNKKEGNESSLKFNAKVSIRPCKSCGEKLERANAKWRSNSPYVTPYVSPTTSLQSTDSCVSTCSDFSVDVNSCDRNSQEESTVEGGVEDLGYQVNGSQKVMESYSEESNNNYEGYTVRDVEIAQGHNFQEEKAYHSEDPIESSVEETEYSLPDDLEVQTWEPPEPENPQDDIDNSVTCNDDDEDHGMEIANLGEPISINSSEDELSGTYRFKEEKLRAMEEMMNGKFKALVGQLLKSVGVSSSDEGDKCWVDIVTSLSWEAASFLKPDAVGGSTMNPDGYVKVKCIAAGSRGQSQLIRGLVFKKHAAHKHMPTKYKNPRLLLISGALGHSIDGLSSFDSMDQEKDDLKSKMDRIEMCHPNVILVEKTVSRDVQESILAKGMTLVFDMKLHRLERVARCTGSPILSCDNLNGQKLRHCDFVYFEKFVEEHDGVGEGGKKPTKTLMFIEGCPTRLGCTVCHYLLLGISVFLFILVLNLPN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02846 495 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 3 475 - -
Vimu3g02846 495 Pfam TCP-1/cpn60 chaperonin family 245 449 IPR002423 GO:0005524
Vimu3g02846 495 SUPERFAMILY GroEL apical domain-like 310 474 IPR027409 -
Vimu3g02846 495 Gene3D GroEL 309 476 IPR027409 -
Vimu3g02846 495 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 309 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02846 Vimu-Chr3 42658614 42669742 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02846 226 474 Acyl Lipid Metabolism Gene Families AT4G33240 46.850 1.34e-65 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02846 K00921 - gmx:100815340 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02846 3 42658614 42669742 Vimu3g02846 3 42658614 42669742 ECH