Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02845 ATGGCAATGACGGCGAAGAGTAACAAGAGCAACACCTCCTTAACCGTTCCGAATCTGCTTCTCTTCTTCACCCTCCTCTCCCTTTTCTCACTTTTCATCTTCCTCGTTTTCCCCACCGCCACAACCCTACACTCTTCTCCCTCTCCTCACGCTTCTACCACCATCAACGTCTACGTTGCTGACCTCCCCCGATCCCTCAACTACGACCTTCTCCACCGTTACTGGACCTCATTCTCCGACTCCCGACTCTCCACCGATGAAGATCACCGCCATCCCCCCGCCCTACATCCACTGGCCAAATACCTGCCTTACCCGGACAACCCTCTCATCAAACAGTACAGCGCGGAGTACTGGATCATGGGCGACCTTATGACCCCACCTCAACATCGCGTCACATCCTTCGCCAACCGCGTCCTCGACCCGCGTCTCGCCGACGTCGTTTTCGTTCCGTTCTTCGCCACGCTCAGCGCGGAGATGCAGCTCGGAGCGAACAAGGGCGCGTTCAGGAAGAAGACCGGGAACGAGGATTACAAGCGGCAGAGGGAGGTCATGGACGCCGTTAGAAGCACCGAGGCTTGGAACCGTTCCGGAGGACGAGATCACGTGTTTGTGCTGACGGACCCGGTGGCCATGTGGCATGTCAAAGATGAGATTGCCCCTGCTATTTTGCTCGTTGTGGATTTTGGCGGTTGGTATAAGCTTGACTCCAGAGGTTCTAACTCTATTGAGAGTGGTGTGGTTCCTCATACTCAAGTTTCTGTGATTAAAGATGTGATTGTGCCTTACACGCATTTGCTTCCGAGGTTGGATTTGTCACAAAACAAGGAGCGTCACCAGCTTCTGTATTTCAAAGGAGCTAAACATAGGCACCGGGGAGGTATGATTAGAGAGAAGTTATGGGATCTAATGATTGATGAGCCTGGTGTTATAATGGAAGAAGGTTTCCCTAATGCAACTGGGCGAGATCAATCAATAAAAGGGATGAGAACATCAGAATTTTGTCTGCATCCAGCTGGAGATACACCGACTTCATGCCGACTTTTTGATGCAATACAAAGTCTTTGTATACCTGTCATTGTCAGTGACAACATTGAGCTTCCATTTGAAGGTATGGTGGATTATTCGGAATTTTCTGTTTTTGTGGCAATTAGTGATGCCCTGAAACCCAACTGGCTGGTCAATCATCTTAAAAGCTTTTCAAAAGAGCAGAAAGCTACGTTCCGCCAAAATATGGCTAGGGTACAGCCCATTTTTGTCTATGACAATGGTCATCCAGGTGGTATTGGACCAGTGCCTTTGGATGGTGCAGTGAATCACATATGGAAGAAAGTTCACCAAAAACTGCCAATGATAAAAGAAACCATAATTCGAGAGAGAAGAAAGCCACCTGGTGTTTCAGTTCCACGACGTTGTCATTGTACCTGA 1425 0.4912 MAMTAKSNKSNTSLTVPNLLLFFTLLSLFSLFIFLVFPTATTLHSSPSPHASTTINVYVADLPRSLNYDLLHRYWTSFSDSRLSTDEDHRHPPALHPLAKYLPYPDNPLIKQYSAEYWIMGDLMTPPQHRVTSFANRVLDPRLADVVFVPFFATLSAEMQLGANKGAFRKKTGNEDYKRQREVMDAVRSTEAWNRSGGRDHVFVLTDPVAMWHVKDEIAPAILLVVDFGGWYKLDSRGSNSIESGVVPHTQVSVIKDVIVPYTHLLPRLDLSQNKERHQLLYFKGAKHRHRGGMIREKLWDLMIDEPGVIMEEGFPNATGRDQSIKGMRTSEFCLHPAGDTPTSCRLFDAIQSLCIPVIVSDNIELPFEGMVDYSEFSVFVAISDALKPNWLVNHLKSFSKEQKATFRQNMARVQPIFVYDNGHPGGIGPVPLDGAVNHIWKKVHQKLPMIKETIIRERRKPPGVSVPRRCHCT 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02845 474 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 52 441 IPR004263 GO:0006486|GO:0016757
Vimu3g02845 474 Pfam Exostosin family 54 395 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02845 Vimu-Chr3 42653434 42656365 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02845 - - gmx:100790936 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02845 3 42653434 42656365 Vimu3g02845 3 42653434 42656365 ECH