Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02841 ATGAAGTTGAACTCCATCCCTCCTACCTTGCCTTTTCTTTCTCTCCTAACCATGGATACATCTTCTTCTCCATATGCATTCATCTTTGCATGTTTGCTATGCACAATGATGTTTGACGCTGGCACTTGCAACTTCGATAACCGCTGCAGCAAAAAAGATACACAAACTCTCTTAAACTTCAAGAAAGGAGTCATGGATCCATCAGGCGTACTTTCTTCATGGTCCACTCAACAAGATTGTTGTGAATGGAGAGGAGTTAAGTGTGACACAATCAACAGTAGAGTCACTCAGCTCGGTCTCCCATGTTCTACAAGTCTTCCTAATTACATTGAAAAAGAAGATAAATCACACTGCCTCACAGGTACCTTTTCCCTTTCCCTGTTAATGGAGTTGGAATTCCTAAACTACTTGGATTTGAACAATAACGACTTCTTAGCTATTCAGTTTGATTCTGTGCATAATCAGAATTATTATAACCTATCTGTATCTATCCGTCCTCGGCAATATCTCAACTCATCAACTCTTCGTCATCTTGATCTGTCCTATAACGAGAATCTTGTCATAAATAGTCTTCAATTTCTTTTTCGCATGCCTTCCTTGGAATATCTTGAGCTCAGTTTCGTTGATCTTCACATGGAAACTAACTGGCTTCAAATAGTCACCACGCTACCATCGCTTTCAGAGCTCTCCATGAGTTATTGCCAACTTAAAGATTTGAGTCCATCTCTTCAACATGCTAATTTTACTGCACTCAAAATTCTTGATCTATCAGGAAATAAATTTCACTCAGAGTTGCCTAAATGGTTATTCAATCTTAGTTGTGGTCTCTCTGATATTTTTCTTGGGTCATGTTCTTTAACAGGACAACTTCCTAAGACATTGTTAAATCTTCGACATTTGGAAAAACTGGGATTGCGAAACAATGACCTCAATGGATCAATACCAGATTGGATAGGTGAACTTGACCATCTACAACATCTTCTTCTCGGAGGAAACATGTTTTCTGGATTTATTCCCAAAAGTTTGGGAAATCTATCATCCTTAACTTACTTGAGTGTTGACTCCAATCAATTCACAGGAGTTGTGTCAGAGAGAAATTTTGCCAAAATGTCAAAATTAAAGTACTTGTATATATACTCTTCACCACCATTAATCTTTGATTTTGACTCCCACTGGATTCCACCTTTTCAACTTGAGAGCCTACAGCTCTCATTTTCAGGTCCTCACCTCCCTGCATGGTTATATACTCAAAGATATATTCAAGATTTATATATTTATGGATCATCGTTTCAGGCCCCAGACAAATTTTGGAATTTTGTATCAAGGGTGTCCCAACTTTCTTTAGAAGATAATTCGATAGATGGGAACTTATCAAACATATTGTTGAACTCTACAGTGGTAAGTTTGTCATCAAATGGTTTGAAAGGTTCCCTGCCTCGATTATCCTCGAATGTAGCTGTTGTCGGGTTATCAAACAACTCATTATCAGGAAGTATCTCTCCCCTCTTGTGTGATCATAAGATGCTGAATGGGAAAAGCAATTTGGTGTACTTGGATATATCTCTGAATCATTTATCTGGAGGTCTTACAAGTTGCTGGAAGAACTGGAAATCATTGATTCATGTTAATTTGGGAAGCAATAATTTAACTGGCAAAATACCCATATCAATGGGTGTGTTATCTAATCTTGCCTCGCTACATCTGCATGAGAATAAGCTCTACGGAGAGATTCCTCCATCGCTACAAAATTGCCATATACTGATCTTCAATGTTCGTGAAAATAACTTTACAGGAAATATACCAAATTGGATACCGCATGCTGCAAAGGCTCTCCAATTAAGATCCAATCATTTCAGCGGTAACATCCCAGCACAAATATGCCAAATGTCTTCCCTCTTTATTTTGGATATTGCAGATAACACAATCTCAGGACACATACCCACCTGCCTATGTAATATCACAGCCTTAGTTGTCAACAATGCTTCCCACAGGGAGTATTCAACAACCCTACAATATAATTTCTCAAATAGAAGTTTTTACTTATTTGAAGAAAGTCTTGAGCTGGTTGTAAAAGGTCTGGTATTAGAATATGGCAATAACCTGAAATTTATGAACTTAATTGATATGTCAAGTAACAATTTATCTGGAACAATTCCTGTCCAAATGTTTAGCCTCTTCGGATTGTGTTCCCTGAACTTGTCGCACAATAAATTAACAGGAAAAATACCTAACGAAATTGGCAACATGAAAAATTTGGAATCCCTTGATTTTTCTATGAATCAGTTTTCGGGTGAAATTCCTCAGGCCCTGTCCAAATTGTCCTTTCTCTGTTGTTTAAACCTGTCATTCAACAATCTCACCGGCAGTATACCATCAGGCACACAACTTCAGGGATTTAGTGAACTCAGCTACACAGGCAATTCTGATCTTTGTGGACCTCCACTTACAAAAGTATGCTTCAAGTTGCCAGATAAAGACAGAAAGCCAAAAAATGAAGATGGAGATGAATCTGAATTTTTTCCATGGTTTCATATTGGTCTAAAATCTGGATTTGTGGCAGGCTTTTTGGGAGTTTTCTGTGCCATTCTCTTAAATGGAAAATGGAGAGAAGCTTACTTCAAGTCTCTTAATGACTTAAGAGACCGACTTTGTGCATGGTTGTCAACAATATAA 2673 0.3779 MKLNSIPPTLPFLSLLTMDTSSSPYAFIFACLLCTMMFDAGTCNFDNRCSKKDTQTLLNFKKGVMDPSGVLSSWSTQQDCCEWRGVKCDTINSRVTQLGLPCSTSLPNYIEKEDKSHCLTGTFSLSLLMELEFLNYLDLNNNDFLAIQFDSVHNQNYYNLSVSIRPRQYLNSSTLRHLDLSYNENLVINSLQFLFRMPSLEYLELSFVDLHMETNWLQIVTTLPSLSELSMSYCQLKDLSPSLQHANFTALKILDLSGNKFHSELPKWLFNLSCGLSDIFLGSCSLTGQLPKTLLNLRHLEKLGLRNNDLNGSIPDWIGELDHLQHLLLGGNMFSGFIPKSLGNLSSLTYLSVDSNQFTGVVSERNFAKMSKLKYLYIYSSPPLIFDFDSHWIPPFQLESLQLSFSGPHLPAWLYTQRYIQDLYIYGSSFQAPDKFWNFVSRVSQLSLEDNSIDGNLSNILLNSTVVSLSSNGLKGSLPRLSSNVAVVGLSNNSLSGSISPLLCDHKMLNGKSNLVYLDISLNHLSGGLTSCWKNWKSLIHVNLGSNNLTGKIPISMGVLSNLASLHLHENKLYGEIPPSLQNCHILIFNVRENNFTGNIPNWIPHAAKALQLRSNHFSGNIPAQICQMSSLFILDIADNTISGHIPTCLCNITALVVNNASHREYSTTLQYNFSNRSFYLFEESLELVVKGLVLEYGNNLKFMNLIDMSSNNLSGTIPVQMFSLFGLCSLNLSHNKLTGKIPNEIGNMKNLESLDFSMNQFSGEIPQALSKLSFLCCLNLSFNNLTGSIPSGTQLQGFSELSYTGNSDLCGPPLTKVCFKLPDKDRKPKNEDGDESEFFPWFHIGLKSGFVAGFLGVFCAILLNGKWREAYFKSLNDLRDRLCAWLSTI 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02841 890 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Vimu3g02841 890 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 696 819 - -
Vimu3g02841 890 SMART LRR_typ_2 773 796 IPR003591 -
Vimu3g02841 890 SMART LRR_typ_2 725 749 IPR003591 -
Vimu3g02841 890 SMART LRR_typ_2 297 321 IPR003591 -
Vimu3g02841 890 SMART LRR_typ_2 560 583 IPR003591 -
Vimu3g02841 890 SMART LRR_typ_2 223 245 IPR003591 -
Vimu3g02841 890 SMART LRR_typ_2 345 366 IPR003591 -
Vimu3g02841 890 SMART LRR_typ_2 248 272 IPR003591 -
Vimu3g02841 890 SMART LRR_typ_2 131 154 IPR003591 -
Vimu3g02841 890 Pfam Leucine rich repeat 298 358 IPR001611 GO:0005515
Vimu3g02841 890 Gene3D Ribonuclease Inhibitor 365 821 IPR032675 -
Vimu3g02841 890 Pfam Leucine rich repeat N-terminal domain 51 89 IPR013210 -
Vimu3g02841 890 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 273 362 - -
Vimu3g02841 890 Pfam Leucine Rich Repeat 175 194 IPR001611 GO:0005515
Vimu3g02841 890 Pfam Leucine Rich Repeat 730 748 IPR001611 GO:0005515
Vimu3g02841 890 SUPERFAMILY L domain-like 48 272 - -
Vimu3g02841 890 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 414 688 - -
Vimu3g02841 890 SUPERFAMILY L domain-like 590 816 - -
Vimu3g02841 890 Gene3D Ribonuclease Inhibitor 49 364 IPR032675 -
Vimu3g02841 890 ProSiteProfiles Leucine-rich repeat profile. 174 195 IPR001611 GO:0005515
Vimu3g02841 890 PANTHER LRR RECEPTOR-LIKE KINASE 49 878 - -
Vimu3g02841 890 SUPERFAMILY L domain-like 224 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02841 Vimu-Chr3 42641815 42644487 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02841 243 868 Receptor kinase-like Gene Family AT2G33060 32.662 8.00e-70 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02841 - - var:108324730 1535.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02841 3 42641815 42644487 Vimu3g02841 3 42641815 42644487 ECH