Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02831 ATGACGATGAGGGTTTCGGTTGTTTTAAGTGTTCTGCTGTTGATCCAGTTTTGGCCTGGGGAAGCTGAGAAATTTTCGGTGGATGGAAAGGTTTTGATTTTGGACGACTCCAACTTTGATTCCGCCATAGCTTCCTTTGATCACATCTTGGTTGACTTTTATGCTCCCTGGTGTGGTCACTGCAAGCGTCTTGCTCCTGAGTTAGATGCAGCTGCGCCTGTACTTGCAACCTTGAACAAACCCATTGTCATTGCAAAAGTAGATGCAGACAAACATACCAGCCTTGCGAAAAAATATGATGTTGAGTATGTTTCTGTGGCCATACCGTTATATGACTTGCTTAAACTGTTTTTGTTTCTTAATAACTGA 369 0.4255 MTMRVSVVLSVLLLIQFWPGEAEKFSVDGKVLILDDSNFDSAIASFDHILVDFYAPWCGHCKRLAPELDAAAPVLATLNKPIVIAKVDADKHTSLAKKYDVEYVSVAIPLYDLLKLFLFLNN 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02831 122 Gene3D Glutaredoxin 19 107 - -
Vimu3g02831 122 FunFam Protein disulfide-isomerase 5-2 20 115 - -
Vimu3g02831 122 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Vimu3g02831 122 CDD PDI_a_family 32 103 - -
Vimu3g02831 122 Pfam Thioredoxin 31 104 IPR013766 -
Vimu3g02831 122 ProSiteProfiles Thioredoxin domain profile. 12 122 IPR013766 -
Vimu3g02831 122 SUPERFAMILY Thioredoxin-like 20 104 IPR036249 -
Vimu3g02831 122 PANTHER PROTEIN DISULFIDE ISOMERASE 7 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02831 Vimu-Chr3 42554570 42559493 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02831 K09580 - gmx:100791778 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02831 3 42554570 42559493 Vimu3g02831 3 42554570 42559493 ECH