Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02811 ATGGCACAAACGAGTAAGAATAGCAATAACCCAGAACAAGAAAAGCATGCAAAGTTCCCAGTTTTAACGGTGCTCAAGAACAACGCCGTTCTCAAGAATATCTTCCTCGTTCACGACGGAAACAGCGAAGATCAGACGGTCCTGATTGGACGACATCCTGACTGCAACATTGTCCTCATGCACCCCAGCGTGAGCCGCTTCCACCTGAGGATTCGCTCCAACCCTTCTTCTCATACTCTTTCTCTCACTTTATCGATGAGAATTTGGAATATAGTGTGGAACGAGAGATTCCGGAGGCTGAAGACGTGGTTTCTGTTTGTTGTGATGAAGAGAGCAAGAGCCATTCTGAAGATAAGGGATTGGGAGTTATCGATGGAACTGAAACATCGTGTTTTCCTACACAGTCTGGTGGTGAAAATATACACTGTGACCATCAAATTAGTGTTTTATCACCCCCACATGTACAATCACCCCCTTATGCAAAATCAGTTGATGAACTTGATTACACTGAGAAAATTGAAGCTTGTCCGAAAGTGGAGATGGCTGGAGAGCCTAACTTGCTTTGCACATTGA 573 0.445 MAQTSKNSNNPEQEKHAKFPVLTVLKNNAVLKNIFLVHDGNSEDQTVLIGRHPDCNIVLMHPSVSRFHLRIRSNPSSHTLSLTLSMRIWNIVWNERFRRLKTWFLFVVMKRARAILKIRDWELSMELKHRVFLHSLVVKIYTVTIKLVFYHPHMYNHPLMQNQLMNLITLRKLKLVRKWRWLESLTCFAH 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02811 190 ProSiteProfiles Forkhead-associated (FHA) domain profile. 47 82 IPR000253 GO:0005515
Vimu3g02811 190 PANTHER TRANSMEMBRANE PROTEIN 18 8 85 - -
Vimu3g02811 190 SUPERFAMILY SMAD/FHA domain 15 72 IPR008984 GO:0005515
Vimu3g02811 190 Gene3D - 1 105 - -
Vimu3g02811 190 Pfam FHA domain 48 77 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02811 Vimu-Chr3 42360746 42365530 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02811 - - var:108324357 161.384
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02811 3 42360746 42365530 Vimu3g02811 3 42360746 42365530 ECH