Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02362 ATGTCAGACTCAGCAGATCCATTAGTGATATCATTCGGCGAGATGCTCATCGACTTTGTTCCTGACACATCTGGTGTCTCCTTGGCTGAGTCCAATGCTTTTATCAAAGCCCCTGGAGGTGCTCCTGCTAATGTAGCTTGTGCCGTAGCCAAACTTGGTGGCAATGCTGCTTTCATTGGCAAGGTGGGAGATGATGAGTTTGGAAAGATGCTGGTTGATATTTTGAGGAAAAACAAAGTGAACACTGATGGCATTTGCTTTGATACGGAGGCAAGAACTGCTTTGGCTTTTGTGACATTGAGGAAGGATGGAGAGAGGGAGTTCATGTTTTACAGAAATCCCAGTGCAGATATGTTGCTGGCGGAGTCAGAATTGAATATGGGTTTGATCAAGAAGGCTAAGGTATTTCATTATGGATCCATTAGTCTGATATCAGAGCCATGCAGATCAGCACACTTGGCTGCAATGAAAGTTGCTAGAGAAAGTGGTGCTTTGCTCTCCTATGATCCAAATGTCAGGCTTCCTTTGTGGCCTTCTAAGGAGGCTGCTAGGTCTGGAATCAAGAGCATATGGTTTGATGCGGACTTCATCAAGGTGAGTGATGACGAAGTTAAATTCCTAACAGAAGGTGATCCTGAGAAGGAGGATGTTGTGATGTCTCTGTGGCACGACAAATTGAAATTGCTTCTAGTGACTGATGGAGAGAAGGGTTGCAGATATTTCACCAAGAACTTCAAAGGAAGGGTAAATGGATTTTCAGTGAAGGCAATTGACACAACTGGTGCTGGTGATTCTTTTGTGGGTGCACTTCTCACAAGTGTGGCCAGGGATGCTTCCATATTTGAGAATGAACAAAAATTGAGAGAGGCTTTGACGTTTTCGAATGCTTGTGGAGCAATTTGTACAACAGCCAAGGGTGCAATTCCTGCACTTCCAACCGTAACAGAGGCTTCCAACTTTATTTCCAACTCTAAACCCTCATAG 984 0.4431 MSDSADPLVISFGEMLIDFVPDTSGVSLAESNAFIKAPGGAPANVACAVAKLGGNAAFIGKVGDDEFGKMLVDILRKNKVNTDGICFDTEARTALAFVTLRKDGEREFMFYRNPSADMLLAESELNMGLIKKAKVFHYGSISLISEPCRSAHLAAMKVARESGALLSYDPNVRLPLWPSKEAARSGIKSIWFDADFIKVSDDEVKFLTEGDPEKEDVVMSLWHDKLKLLLVTDGEKGCRYFTKNFKGRVNGFSVKAIDTTGAGDSFVGALLTSVARDASIFENEQKLREALTFSNACGAICTTAKGAIPALPTVTEASNFISNSKPS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02362 327 PANTHER HEXOKINASE FAMILY MEMBER 8 319 - -
Vimu3g02362 327 Pfam pfkB family carbohydrate kinase 8 313 IPR011611 -
Vimu3g02362 327 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 39 63 IPR002173 GO:0016301
Vimu3g02362 327 SUPERFAMILY Ribokinase-like 9 319 IPR029056 -
Vimu3g02362 327 FunFam Probable fructokinase-2 6 325 - -
Vimu3g02362 327 CDD bac_FRK 8 308 - -
Vimu3g02362 327 Gene3D - 5 326 IPR029056 -
Vimu3g02362 327 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 258 271 IPR002173 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02362 Vimu-Chr3 38075598 38077355 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02362 K00847 - gmx:100775586 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02362 3 38075598 38077355 Vimu3g02362 3 38075598 38077355 ECH