Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02359 ATGGCAGTGATAAGTGCTGTTCATTCTGTTAGCTCTCTGCATTTACAATCACACCTTCAGAGGCTTAACAATGGAGAATTCTTCTTCTCTACAAGACCAAGGAAAATGAAGGTCCCTCTTCCTTGCCATCACCATCACCATCAACGTCCAATCTACTCAAGTAATGCTTTTGGTTGTAGTGACAGAACCAGTATCATAATAAACTCCACATCTGGTTCTTCCACAGCAACTTCTGCTGCTGAGGGGTCCCTCTCTGAGGTAGAAAAGATAAAGCAGAGGTTTCGTACATGGCAATGGAAGGGTCAATATTCAATCAACTACTTTGTTTCTTCGGACTCTCCTCAGCAGTTGCAAGCCAACCACCCTCCTCTCTTACTTGTTCATGGCTTCGGTGCCTCCATTCCTCACTGGCGCAGGAATATCAAGATTCTAGCCCAGAATTATACTGTGTATGCTATTGATCTTCTTGGTTTTGGTGCTTCAGATAAGCCTCCAGGCTTTCAATATACCATGGAAACTTGGGCTCAGTTGATCTTGGACTTCTTGAATGAAGTTATTCAGAAGCCAACAGTACTAATAGGAAACTCTGTTGGAAGTCTCGCCTGTCTCATTGCTGCCTCAGATTCAAATCAAACTCTTGTGAGAGGCATTGTGCTGTTAAATTGTGCTGGTGGCATGAACAACAAAGCGATCGTTGATGACTGGAGGATCAAGTTACTATTACCCTTGCTTTGGCTGATTGATTTTTTATTAAAGCAAAAGGGAATTGCCTCAGCAATTTTTGAGCGAGTTAAACAAAGAGAGAATTTAAGAAATGTTTTGAGTTCAGTGTATGGAAATAAGGAGTCAGTGGATGAAGAACTAGTGGAGATCATCAGGGAACCAGCCGATGCTCCAGGGGCCTTAGATGCATTTGTGTCCATTGTGACTGGTCCACCGGGCCCCAATCCGGTGGTGTTGATGCCAAACATATCCTTGCCTGTTTTACTTTTGTGGGGAGATGAAGATCCCTTTACTCCAATTGATGGACCTGTTGGCAAGTACTTTTCTTCATTACCTTCTCAACAAGAGAATGTTAAACTCTTCTTACTTGAAGGTGTTGGACATTGTCCCCATGATGACAGACCTGACTTAGTACATGAAAAGTTGCTTCCCTGGTTGGCAAGTCTTTGA 1173 0.4305 MAVISAVHSVSSLHLQSHLQRLNNGEFFFSTRPRKMKVPLPCHHHHHQRPIYSSNAFGCSDRTSIIINSTSGSSTATSAAEGSLSEVEKIKQRFRTWQWKGQYSINYFVSSDSPQQLQANHPPLLLVHGFGASIPHWRRNIKILAQNYTVYAIDLLGFGASDKPPGFQYTMETWAQLILDFLNEVIQKPTVLIGNSVGSLACLIAASDSNQTLVRGIVLLNCAGGMNNKAIVDDWRIKLLLPLLWLIDFLLKQKGIASAIFERVKQRENLRNVLSSVYGNKESVDEELVEIIREPADAPGALDAFVSIVTGPPGPNPVVLMPNISLPVLLLWGDEDPFTPIDGPVGKYFSSLPSQQENVKLFLLEGVGHCPHDDRPDLVHEKLLPWLASL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02359 390 PRINTS Alpha/beta hydrolase fold signature 328 342 IPR000073 -
Vimu3g02359 390 PRINTS Alpha/beta hydrolase fold signature 147 162 IPR000073 -
Vimu3g02359 390 SUPERFAMILY alpha/beta-Hydrolases 90 387 IPR029058 -
Vimu3g02359 390 Gene3D alpha/beta hydrolase 70 389 IPR029058 -
Vimu3g02359 390 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 70 389 - -
Vimu3g02359 390 Pfam Alpha/beta hydrolase family 124 380 IPR000073 -
Vimu3g02359 390 FunFam Predicted protein 83 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02359 Vimu-Chr3 38062844 38065626 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02359 124 390 Miscellaneous Gene Families AT1G80280 25.000 6.07e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02359 - - gmx:100775473 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02359 3 38062844 38065626 Vimu3g02359 3 38062844 38065626 ECH