Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01950 ATGGAATACGTTAAGGATGCAGATGAAGCTGCTCTACTTCAAGATTTTTTGATTTGTGTTGAGATGCTTGTTGCAGCTGTTGGACATTTTTATGCATTTCCATACAAAGTATATGCTGGGGCTAACATAGGTGGATCCCGTGGGTTGACAGCTAGCCTTGCTCATGCTTTGAAATTAAATGACTTCTACCATGATACCGTCCACCAGGCCAGTCTCACTTTTAATATTCTTCTCATATTTGCACCGACATACCATGATTATGTTCTCTACAACCACGGTGAAAGCGGTGAAGAGGGAACTAGGAAGTATAGGTCACGAACTTTTGTTCCAATTGGTCCAGAAATGGACACTGTGAGAAGAAATAAGCATTTGTTTGGAAACAAATCAGCAGATGACATACAGCTCTCAAGCTTTTCTTCTAATAGTAGCGCTGCCTCAAATCCTGGTCTCAATTCCGAAGTATCTCATTCTGGTGGAATGAAATCTTCCTTACTGGAGGATGCGTCAAATTCTTTATCTGCGCCCTACGATATGACACTTATTGACTTGGATACACCCAGTTATTCTGAAAAAGTTCCAGCAGCTGATAAAGCCGATACTCGGTGGTAA 609 0.4138 MEYVKDADEAALLQDFLICVEMLVAAVGHFYAFPYKVYAGANIGGSRGLTASLAHALKLNDFYHDTVHQASLTFNILLIFAPTYHDYVLYNHGESGEEGTRKYRSRTFVPIGPEMDTVRRNKHLFGNKSADDIQLSSFSSNSSAASNPGLNSEVSHSGGMKSSLLEDASNSLSAPYDMTLIDLDTPSYSEKVPAADKADTRW 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01950 202 Pfam Organic solute transporter Ostalpha 3 38 IPR005178 -
Vimu3g01950 202 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 10 146 IPR005178 -
Vimu3g01950 202 MobiDBLite consensus disorder prediction 138 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01950 Vimu-Chr3 34430852 34434887 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01950 - - vun:114192346 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01971 6 17671297 17674886 Vimu3g01950 3 34430852 34434887 PCT