Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01852 ATGGGTAAAAACAAAATCTTTACTCAGACACCCTCCAACTCCTCTTCTCTCTCCCTCGCTTGGATTCTCCTATGCGCGTTCCAAGTTTGCGTCGGTTTGGGCATCGAGGGGAGCATTGCGGCTGGCCTTTACGACTACGATGATGACGTCTCCGGTTTCGCCGCGGAGAGAAGCCTGTTGAGCAGGATGATTTTTCTGCTGGGCCTGCACGAGACCACCTATGTATGGTGTCGGATGGTGGTGAGACCCGTCGTGGATGACACTGTATTCGCCGGGGCCCGGAAAGAGAGGTGGGTGGAGAGGGTGGGCCTGGCTGCGGGCTTGGGCATTTTGTGGTGGTGGAGGTTGAGGGAGGAGGTGGAGACTCTGGTGGTTGTAGCCCAAGTGAAGAATGAACAGTTGATGGATGTGGGAATTTGTGACTTTGTTGGGTGGTGGTTGTATTATCTCGTTGTGACCATTGGGATGGTGAGGATTGTGAAAGGTATGATGTGGATGTTCATGGTTTTTCTCTGTAGAAGAAGGCCAACAGCAATAGAGGTGGAATCGAATCAGAACGATGACAAGGTGTAG 573 0.5218 MGKNKIFTQTPSNSSSLSLAWILLCAFQVCVGLGIEGSIAAGLYDYDDDVSGFAAERSLLSRMIFLLGLHETTYVWCRMVVRPVVDDTVFAGARKERWVERVGLAAGLGILWWWRLREEVETLVVVAQVKNEQLMDVGICDFVGWWLYYLVVTIGMVRIVKGMMWMFMVFLCRRRPTAIEVESNQNDDKV 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01852 190 PANTHER TRANSMEMBRANE PROTEIN 2 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01852 Vimu-Chr3 33290371 33290943 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01852 - - gmx:100794387 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01852 3 33290371 33290943 Vimu3g01852 3 33290371 33290943 ECH
Vimu6g02050 6 18357349 18358548 Vimu3g01852 3 33290371 33290943 PCT