Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01679 ATGTTATCTGAAAGTCAAGCCTCAAAACTTGGTGTTGGCATAAAGCGGAGAACTTTCACTGGGTTTGTGATTGACCTTGTCATCCTTTGTGAAGATTCAGAGGAGGTGTTCATCTTTTGTGACGATTCAAAGGAGGTGTTCATCCTTTGTGAAGATTCAAAGGAGGTGTTCATCCTTCGTGAAACACTCGGAGGAAGTGTTCCACCCTTGAAGAGGAAACCTGCTAAAGCCGGGCCCATTGAGCAGAGATTTTTTGAGAAACAAATGGTGGCTGATGTGCCAGCCACCGAAGAAGAGAGTTTTGGTTTCCAAAACCTCGTTTTTCCCAACACAGAAAAAATGTTGCCGAAACTGTTTTTGATGGCTTCTCATGGATGCCCTGTGGGACTTGCTTTGCAGCAAGACTTGCCTATGGTTGGCAGCACCATTACCAAGGGTTGCCTACCATTATTGCCTTCTCCTGTACTGAAACCGGCAATGATCAGATATGGATCTCCGCTAAATCCATTTGAGTCAACCAAGCCCCAGAAAGAGTGGTTCGATTCTGATCATATTGTCAACGTGAACTTGTCGACTCAAAGACCCATGCTTATTGATGTTCAAGGAACTTATCCAAGCCCAGTACGTTTTGGCTTTGGCATCGTTGAACAATGCTCTCAGCAGGATAAAATTTTGCAGTGCGTCATGTCTGAGAGTGCTGAAGCTGGGATAGGTGGTGTGCATATATCTCTATTGTCTGGCTTGGTGGATTTGCAATTGTCAGGCATTGATGAACCTCAAAAACCATTGACACCTGTTATCCCAGAAAGCAAATTCTTCATCCCGAAGCTTTTGCTAGATATTTTTCAAGATTCGGCCTTTAGTTCAAAGGTTACAGTTCATCCAGATGGTCAAGTCACTTTTATGGGTACTGCATTTGAGATGAAAGATCTTCTTTCTGTAGTTGCTGACTCATACTTATTACGGAAGGGGGAAAGACAATTTATGCTTGTTCCACACTTCAGCAGGATGAGTATCAAAGAAATAGAAGTAAAAAGTGTTTCCTCCACGCTGGATATTCATTCTACATTGACTGTTCCTTTGAGGAGTCCTGAGAAAGCCAAAGTCAAGCCTTCACGAAAGAAGAACAAGAAAGTAGCCAGAGATAGGGATCTCTTCAAGAAGAACTACTTACATGCATGTGAGAGTCTTCTGTCCATATTGGTTGACAAGAGGCAACACCGCAAAACAGCAATTCTCTCTCTCAAGAAATCTGGCCCTGAACTTCCTGAGCTCCTCACACAATTTTCTGCTGGCATTGCCGGTACTGGTCTTGCTGTTCTGCTCTCTGTGATCTGTAAGCTTGCTTGTGGAAGGGGGATTTCCTTTTGTTCTTATAAGCTCCTCAACACAGGTTTTGGATTTGGGTTGGTTTGGCTTTCTTGGGCAGTTAATAAGCTAAGGGATACAATTGTTGGCATTAACAAGAATGGTGGAAAGCCAAGACTGAAAGATGAGGAGATAATTCAAAAGGTGGACAAGAGCCTAAGAGAAATATACTTCAGATCCGCTGCATTGCTGGCAGTTGCAGTGCTAAGGCTTGCTTGA 1587 0.4335 MLSESQASKLGVGIKRRTFTGFVIDLVILCEDSEEVFIFCDDSKEVFILCEDSKEVFILRETLGGSVPPLKRKPAKAGPIEQRFFEKQMVADVPATEEESFGFQNLVFPNTEKMLPKLFLMASHGCPVGLALQQDLPMVGSTITKGCLPLLPSPVLKPAMIRYGSPLNPFESTKPQKEWFDSDHIVNVNLSTQRPMLIDVQGTYPSPVRFGFGIVEQCSQQDKILQCVMSESAEAGIGGVHISLLSGLVDLQLSGIDEPQKPLTPVIPESKFFIPKLLLDIFQDSAFSSKVTVHPDGQVTFMGTAFEMKDLLSVVADSYLLRKGERQFMLVPHFSRMSIKEIEVKSVSSTLDIHSTLTVPLRSPEKAKVKPSRKKNKKVARDRDLFKKNYLHACESLLSILVDKRQHRKTAILSLKKSGPELPELLTQFSAGIAGTGLAVLLSVICKLACGRGISFCSYKLLNTGFGFGLVWLSWAVNKLRDTIVGINKNGGKPRLKDEEIIQKVDKSLREIYFRSAALLAVAVLRLA 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01679 528 PANTHER OS05G0143300 PROTEIN 117 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01679 Vimu-Chr3 30861565 30868543 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01679 - - gmx:100800200 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01679 3 30861565 30868543 Vimu3g01679 3 30861565 30868543 ECH
Vimu6g02863 6 25308653 25311673 Vimu3g01679 3 30861565 30868543 PCT