Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01672 ATGGCGCCTAGCCGCAGAAAGGGCGTCAGTAAGGCGGCGGCGGCGGCTGCCGCCTGCCGGCAGTGGAAAGTGGGCGATCTTGTGCTCGCCAAAGTCAAGGGCTTCCCTGCATGGCCTGCCACGGTTGCATCGGGGGTTGCATGTTGGGGGTTGCATGTTGGGGGTTGCATGTTGAGTAGGAGTCTGAATGTTGATCCGAGAACCAAAGGTCTCCAGTGTACAACCCAGTTTCCCAACAATGTAAGTGAGCCAGAGAAGTGGGGTTACTCTACTGATTGGAAGAAGGTGCTTGTTTACTTCTTTGGAACGCAACAAATTGTGGATAGGATAGGATGGACAAATGGTGGTTGTGGCTGGGATTGTGATCATGGAGATGGTGATAGTAGTGGGTCAGTGGTACAAGCTGATGATTTACAGTCATCAAAGGCCACTTATAAGGATAGTGCTGTTGTGATAGTTACCTTTAGCTTGCTTGATGTTATACGGCATCTGTATATTTTGGTCAAAACCCTAGTTTAG 519 0.499 MAPSRRKGVSKAAAAAAACRQWKVGDLVLAKVKGFPAWPATVASGVACWGLHVGGCMLSRSLNVDPRTKGLQCTTQFPNNVSEPEKWGYSTDWKKVLVYFFGTQQIVDRIGWTNGGCGWDCDHGDGDSSGSVVQADDLQSSKATYKDSAVVIVTFSLLDVIRHLYILVKTLV 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01672 172 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 106 - -
Vimu3g01672 172 Gene3D - 4 146 - -
Vimu3g01672 172 SUPERFAMILY Tudor/PWWP/MBT 20 105 - -
Vimu3g01672 172 ProSiteProfiles PWWP domain profile. 24 113 IPR000313 -
Vimu3g01672 172 Pfam PWWP domain 25 106 IPR000313 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01672 - - lsv:111886378 102.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01672 3 30793085 30795587 Vimu3g01672 3 30793085 30795587 ECH
Vimu6g02854 6 25235238 25236412 Vimu3g01672 3 30793085 30795587 PCT