Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01623 ATGAAGGACTTTCCTTCTTGTTTTGGAGAAAATGGGGTTCAGGTTGCTGACTCATCCTCATCAAGCACCACAAGAGCGGCTCAAAATGTTGTCACGTGTGTCTACCAGTGCAAATTAAGACGCCGTTCATGTCTCATCACGGTCTCCTGGACCAAAACTCTGATGGGTCAAGGCTTGAGAGTGGGAATTGATGATTTGGGAAATCATTGTCTCTGCAAGGTTGAGATAAAGCCATCGCTATTCTCAAAGAGAAAAGGGTCCAAGAATTTGGAGGTCCAATCTGGTAAAATTGATATCTTTTGGGATTTGAGCTGTGCCAAGTTTGGTTCCGGGCCTGAGCCGCTGGAGGGGTTCTACTTAGCGGTGGTTTTCAACAAGGAGCTGGTGTTGCTGCTTGGGGATCTGAAAAAGGAGGCATGCAAGAAGATGGACAGTGATTGTGCTTTTTCCCACAGTGGTACCGTTTTCATTGCAAAAAGAGAGCATATTTTTGGGAAGAAGTTTTATGGTGCAAAGGCTCAGTTTTGTGACAAGGGGCAAGTGCATGATGTCACAATTGAGTGTGATACTGTGGGTTTTAACGATCCCTCTCTTGTGATTCGGATTGATAGCAAGACAGTGATGCAGGTGAAGCGTCTCAAGTGGAAGTTCCGAGGGAATCACACCATTTTGGTGGATGGGGTTCCAGTTGAAGTGTTTTGGGATGTGCATAGTTGGCTCTTTGGGAATGCTATGGGCAATGCAGTGTTCATGTTCCAAACATGCATTTCAAGTGAAAAGGTGTGGGAAGGCCAATCAGCTTCTGATACCACTGCACTATCATGGGCTTCTTCTCAGCAGTTTAAGGATTCCCAGTTCCAATGCTTTGGCTTCTCTCTCATTTTGTATGCTTGGAAACATGAGTAG 906 0.4536 MKDFPSCFGENGVQVADSSSSSTTRAAQNVVTCVYQCKLRRRSCLITVSWTKTLMGQGLRVGIDDLGNHCLCKVEIKPSLFSKRKGSKNLEVQSGKIDIFWDLSCAKFGSGPEPLEGFYLAVVFNKELVLLLGDLKKEACKKMDSDCAFSHSGTVFIAKREHIFGKKFYGAKAQFCDKGQVHDVTIECDTVGFNDPSLVIRIDSKTVMQVKRLKWKFRGNHTILVDGVPVEVFWDVHSWLFGNAMGNAVFMFQTCISSEKVWEGQSASDTTALSWASSQQFKDSQFQCFGFSLILYAWKHE 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01623 301 PANTHER EXPRESSED PROTEIN 4 299 IPR008586 -
Vimu3g01623 301 Pfam Plant protein of unknown function (DUF868) 27 299 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01623 Vimu-Chr3 30231599 30232504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01623 1 301 EF-hand Containing Proteins AT5G28150 62.376 3.44e-126 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01623 - - gmx:100793503 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01623 3 30231599 30232504 Vimu3g01623 3 30231599 30232504 ECH
Vimu6g02804 6 24679131 24681427 Vimu3g01623 3 30231599 30232504 PCT