Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01559 ATGGAAGCAAAATTGGTTGCACAGTGCAAGATTCCAACCCTAACTCTACCTCATTGGAAACCAAAATACCCTTGTGTGGTTGCAGTGCTGGCAAGGCCTGCTGCTGATGTTTCAGCACAAACAAGAAAAGCTAATGTGTACAAAGATTCCTTTTTTGATAACATAGCCATAAACCACATCTCAAAATGCCTTCAAGAGGCAACAGGACTCAGAAACAGTAAGAGTGGGTATGAGAGCCTAGTAGAGGCAGCTACCATGGCTTCACAGAATTTTAGTCCCATTCAACAGCGTCAACTTATCACTCAAGCACTTCATAGAGCCTTCCCCAAGCCATTTTTTTTATTGTCTTTTCCTTCTCACATGGTTGGTGTCTTTCACTGTGACACTTCCCACTTACATTTGCTTGACTTGATGGAACTGAACAAAAACAGTGTACATTCGACAACCAAGGACCGAACACAGATAAAGAAAGTGTTACCACCGTCTAAATTCACGAGGACATTGTTTGCCATCTTCACCACTTTGTTCTTTGCTTGGCTAGTGGGCCCCTCCGAGGTGAGAGAATCGGACATGGACGAGGGGAGAAGAGAAAAAAATGTAGTTCACATAAAAAAGTGCAGGTCAGTTTAG 630 0.4302 MEAKLVAQCKIPTLTLPHWKPKYPCVVAVLARPAADVSAQTRKANVYKDSFFDNIAINHISKCLQEATGLRNSKSGYESLVEAATMASQNFSPIQQRQLITQALHRAFPKPFFLLSFPSHMVGVFHCDTSHLHLLDLMELNKNSVHSTTKDRTQIKKVLPPSKFTRTLFAIFTTLFFAWLVGPSEVRESDMDEGRREKNVVHIKKCRSV 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01559 209 PANTHER BETA-CAROTENE ISOMERASE D27 38 207 IPR038938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01559 Vimu-Chr3 29381886 29383649 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01559 K17911 - gmx:100782912 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02774 6 24318132 24325928 Vimu3g01559 3 29381886 29383649 PCT