Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01388 ATGATCCTCTTGGAAAAATTCGGGTTCACGCACACTGGCCAGGTGTCGATCGCGGTCTCCTCCGTGTCCGTTGTGGCGTCGTCGGGGTCGCAACCGGACTCTTCCCGGTTAGGGTTCTTCCTCCTGAGCGAAGAGTCCCTTCTCCAAGTCCTAATCGAGATCCAGCAAAACCCTAGGTTCTGCGTCCTGGACTCGCACTACATCAAGGGCCTCTTCACCTTCCGCGAACTTTCTCCCCCTCCCGCCGCCTCTGTCAACCGCACCTTCCCCGTTACAATCGCCAATGAATACAGTCTCTTCTTCGCCAATTGCGCGCCGGAGACCTCCGTCTCCATGGCGGTCCACACGGAGCTCTTCAACCTCGACCCCGACAACTCCCGCGACTACCTCTCCGCCGGCCAGACCCAGCTTCCCTCCCTTTTCTTCCTATTTTCCGTCGCCTACTTCGCCTTCCTCGCCCTCTGGCTCTACCTCTGCCACTCCAACCGCCGCTCGCTCCACCGGATCCACCTCCTGATGGGTGCCCTTCTCCTCATGAAGGCCCTCAACCTCCTCTGCGCCGCCGAGGACAAGCACTACGTCAAAATCACCGGAACACCCCACGGCTGGGATGTCCTCTTCTACATCTTCCAGTTCATCCGCGTCGTCCTCCTTTTCACCGTCATCGTCCTCGTTGGCACTGGCTGGTCCTTCCTCAAACCCTTCCTCCAGGAGCGCGAGAAAAAGGTCCTTATGATCGTTATCCCCCTCCAGCTCCTCGCCAATGTCGCCTCCGTAGTCATCGGTGAAACCGGCCCCTTCATCAAGGACTGGGTTACTTGGAACCAGGTCTTCTTGCTCGTCGACATCATCTGCTGCTGCGCCATAATCTTCCCTATCGTTTGGTCCATTAGGTCTCTCAGGGAAACCTCCAAAACCGACGGAAAAGCCGCCAGGAACCTCGCCAAGTTAACCCTCTTCAGACAATTCTACATCGTTGTCATTGGCTACTTGTACTTCACGCGCATTGTTGTCTTTGCACTTAAAACCATTGCGGCGTACAAGTACAAGTGGGTGAGCAATCTCGCCGAGGAGACTGCTAGCCTCGCCTTTTATGTGGTCATGTTCTACATGTTTAGGCCTGTGGAGAGGAATGAATACTTTGTGCTCGATGAGGAGGAAGAAGAGGCCGCGGAGATTGCCCTTAGGGACGAAGAATTTGAGCTTTGA 1209 0.5575 MILLEKFGFTHTGQVSIAVSSVSVVASSGSQPDSSRLGFFLLSEESLLQVLIEIQQNPRFCVLDSHYIKGLFTFRELSPPPAASVNRTFPVTIANEYSLFFANCAPETSVSMAVHTELFNLDPDNSRDYLSAGQTQLPSLFFLFSVAYFAFLALWLYLCHSNRRSLHRIHLLMGALLLMKALNLLCAAEDKHYVKITGTPHGWDVLFYIFQFIRVVLLFTVIVLVGTGWSFLKPFLQEREKKVLMIVIPLQLLANVASVVIGETGPFIKDWVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKAARNLAKLTLFRQFYIVVIGYLYFTRIVVFALKTIAAYKYKWVSNLAEETASLAFYVVMFYMFRPVERNEYFVLDEEEEEAAEIALRDEEFEL 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01388 402 Coils Coil 383 402 - -
Vimu3g01388 402 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 6 390 IPR009637 GO:0016020
Vimu3g01388 402 Pfam Lung seven transmembrane receptor 97 378 IPR009637 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01388 Vimu-Chr3 26175174 26176382 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01388 K22985 - gmx:100815429 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01388 3 26175174 26176382 Vimu3g01388 3 26175174 26176382 ECH
Vimu6g02591 6 22503189 22504066 Vimu3g01388 3 26175174 26176382 PCT