Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01361 ATGGGCACGCCTGCTGTTAGTAATGTACCAGGCTACATCATAAGTAAGCTTGAAGGTACCTTTATTGAGTCACTGCATATACAAGATGCTTTAAAGTTGGAACATGCATATGAGGTGGATCGTTTTGATGATTTATACGTGGAGGAGGAGAATTTGAGTGGAGGTTTTGAACCGCAAGAAACCAAATTAGAGATTAAGTGTTTGAAAGATTGTTCAACGTTTTCTTATTCTGATAAATGTCTTCCTTCAAGCTGTTCTGACGAGGAGACAGATAAATCATTCTCTAAGCAATCTCGTCAAAACTACTGCTCAGTATCTTTGGAAGCTCCTGCAAAACTTGTATCTGCCATGAAGGGTAGCCGTGAAAAAGAAAGGGGATCTCAAATTAAATTGACTGTGAAATGGGCCCCTGATGTGTATGATCCAGTACCGACATTGTCATCACATACTGTTAAACACAAGAAACATCAGAAACCGAGGATGAGGAAGAGTGAAAAGAAAAACGGAAAAAAGAGCCAGAAGGTAAGTTACTCTAGAAGAAGCAGCAGCAGCAGCAAAGATAAACCGTATCGAAACAGGTGGCTGCATTCTGGTGAAGAAGTGTTTGAAGCTTCCACTGAAGTAGACGATCTTAAAGTTGCTAACCATGATTCCTACTGTGCAACTAGCTACTTAAAAGCATCAATTACAAAGGTTCACTGGCCTATTGGAGAAGCGCTGTAA 723 0.4039 MGTPAVSNVPGYIISKLEGTFIESLHIQDALKLEHAYEVDRFDDLYVEEENLSGGFEPQETKLEIKCLKDCSTFSYSDKCLPSSCSDEETDKSFSKQSRQNYCSVSLEAPAKLVSAMKGSREKERGSQIKLTVKWAPDVYDPVPTLSSHTVKHKKHQKPRMRKSEKKNGKKSQKVSYSRRSSSSSKDKPYRNRWLHSGEEVFEASTEVDDLKVANHDSYCATSYLKASITKVHWPIGEAL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01361 240 MobiDBLite consensus disorder prediction 146 192 - -
Vimu3g01361 240 PANTHER OS05G0113500 PROTEIN 11 239 - -
Vimu3g01361 240 MobiDBLite consensus disorder prediction 149 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01361 Vimu-Chr3 25374210 25375044 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01361 - - var:108324906 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01361 3 25374210 25375044 Vimu3g01361 3 25374210 25375044 ECH
Vimu6g02614 6 22752127 22755089 Vimu3g01361 3 25374210 25375044 PCT