Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00304 ATGGTTCCCTTGTATGCGCTCTATCCTGATTTTAGTGGGAAAGAAGATGTTGATGAGGATGATCCTTCTCCCAGTCAAGGCCCGTCCTGGTCAAGAAAACACTATGGAAGGCACTGGAATGGCAAACAAAGATCAAAACATCGGTTCAGAAGAGGTCATGAATTTTGCAAAGATGACTTTGATGTTGAGACTGGTTTTTGCTCTTCTTTCGGTGGCAATCGATCTTTCTATTGGTCCTTTATAAATGAGGAAAATCGTCAGAGGGGGTCAGGAGGTTTTTCTAATAACAGGAAATCTCAGAAGTGGAGACATCAAAGTGAAAATGAATATGGCAAATCAACCAAAGCAGAGTCTGATTGTTCACATTCAGATGTAGTTTCAAATAGATTAGCCCTTGGATTGAGTGATTCTGGCCCTCTGAAACTTGAAGATGTGAAAAATGCTTCTTTTGCATTTTCTCTTCAATGTGATTCTAAACATCCTTATGAAAACAGGTACCGGAAATCTGCTTTAAAGTGGCATCCATATCGTCATCAAGGCTTTTCTAAGGTTATAGCAGAGGAAAAGTTCAAGCATTGCAGTGCTGCTTATCAATCTTTGTGTGATAAACTGACCTTGTATTAG 624 0.3958 MVPLYALYPDFSGKEDVDEDDPSPSQGPSWSRKHYGRHWNGKQRSKHRFRRGHEFCKDDFDVETGFCSSFGGNRSFYWSFINEENRQRGSGGFSNNRKSQKWRHQSENEYGKSTKAESDCSHSDVVSNRLALGLSDSGPLKLEDVKNASFAFSLQCDSKHPYENRYRKSALKWHPYRHQGFSKVIAEEKFKHCSAAYQSLCDKLTLY 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00304 207 MobiDBLite consensus disorder prediction 87 119 - -
Vimu3g00304 207 MobiDBLite consensus disorder prediction 13 43 - -
Vimu3g00304 207 SUPERFAMILY Chaperone J-domain 163 203 IPR036869 -
Vimu3g00304 207 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 14 205 - -
Vimu3g00304 207 Gene3D DnaJ domain 156 202 IPR036869 -
Vimu3g00304 207 CDD DnaJ 165 202 IPR001623 -
Vimu3g00304 207 MobiDBLite consensus disorder prediction 100 119 - -
Vimu3g00304 207 Pfam DnaJ domain 164 203 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00304 Vimu-Chr3 2887452 2888732 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00304 - - gmx:100812123 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g00304 3 2887452 2888732 Vimu3g00304 3 2887452 2888732 ECH
Vimu6g02937 6 25938644 25942056 Vimu3g00304 3 2887452 2888732 PCT