Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00299 ATGAGGATCCGTAAGAGACAAGTGCCTTTCCCTCTATTGCCGGTGACTCACTCAGATCCCAACCTGATCAACCGGTCACCGGTGATGGTGCAACTCAACGATGCCATCACCACCTCACTCCACCCTTCTTGCACTTTTGGTGCGGCTGCTGCACCCTCTTTCCTCTTGGATCCCTCTCAGCCGTCCGATCAGCCTCTCCCTCCGATCGGAAAACCCACCAACGGCTCTGATGAGACCTCTGGAGAAGGGGAGACACAGAACTTGAGGCAGCAGCGCAAGAAGCAAGGAGACTCTTTGATGGAAGATGAGAGAAGGGAAGAAGAAGGAAGGGGACATAAGGGTAATGATACCAGGAAAGGAAGAATCTCGTGGTCTCAGACAGTTTCACCTTCAAGCCCTCCTAAACAAGATGGGAGATGGAGCGAGGGAGATAAAGCTTTCCCACCCAAGAAACGAAGAGGGACCTTCGAGAGTGCAACAGAGGATAACAGCAACGATGAGGAGGAAAATGATGATGATGATGATGATAAGAAGAGTTTGAAGACGAAGATGAAGAGAATGAAGACAAAGATGAACAGGAAGTGTTCGAGGCGAGGTGACAGTAACAAGGAAGGAGGAGAAGAAGAAGATGATGATGATGAGTACGAAGAAGAGGTAACAAGAGAAACGAAACCCGAAGTGCATGTTGGTAAGAAGAGGGTAAGGGGTGGTGCACTAATGGAAGGTTCAAGGTGCAGTCGTGTGAATGGAAGAGGATGGAGGTGTTGTCAACAAACCTTGGTGGGTTACTCTCTCTGCGAGCATCACTTGGGGAAGGGAAGGTTGAGGAGCATGACGAGTGTGAGAAACAAGTCCATTGGCACAACCAGTGGTGCACCAAAGAGCAACATGCCAAAGTCTGAGTCTTCCTTAGAGAAGCAAACAGCAAAGCCTAGCAGTTTCACTGAAGACCCTTTGGGAAAAGATGCTGAAAACAACAATGAGAAGAAGCCATTGATTGTCACAAAGAGGAGGATGAAGCTTGGAATGGTGAAAGCTCGATCCATAAGCAGCTTGCTGGGACAGTCAAACACTGAAATCGTTGCCATTGCTGAGGATAGTGATAACAAGTAA 1113 0.4843 MRIRKRQVPFPLLPVTHSDPNLINRSPVMVQLNDAITTSLHPSCTFGAAAAPSFLLDPSQPSDQPLPPIGKPTNGSDETSGEGETQNLRQQRKKQGDSLMEDERREEEGRGHKGNDTRKGRISWSQTVSPSSPPKQDGRWSEGDKAFPPKKRRGTFESATEDNSNDEEENDDDDDDKKSLKTKMKRMKTKMNRKCSRRGDSNKEGGEEEDDDDEYEEEVTRETKPEVHVGKKRVRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNKSIGTTSGAPKSNMPKSESSLEKQTAKPSSFTEDPLGKDAENNNEKKPLIVTKRRMKLGMVKARSISSLLGQSNTEIVAIAEDSDNK 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00299 370 MobiDBLite consensus disorder prediction 277 333 - -
Vimu3g00299 370 MobiDBLite consensus disorder prediction 87 119 - -
Vimu3g00299 370 MobiDBLite consensus disorder prediction 278 314 - -
Vimu3g00299 370 MobiDBLite consensus disorder prediction 120 136 - -
Vimu3g00299 370 MobiDBLite consensus disorder prediction 138 160 - -
Vimu3g00299 370 ProSiteProfiles WRC domain profile. 239 283 IPR014977 -
Vimu3g00299 370 PANTHER EXPRESSED PROTEIN-RELATED 103 353 - -
Vimu3g00299 370 Pfam WRC 241 281 IPR014977 -
Vimu3g00299 370 MobiDBLite consensus disorder prediction 205 219 - -
Vimu3g00299 370 MobiDBLite consensus disorder prediction 55 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00299 Vimu-Chr3 2840026 2842191 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00299 - - gmx:102665471 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g00299 3 2840026 2842191 Vimu3g00299 3 2840026 2842191 ECH
Vimu6g02926 6 25882480 25884417 Vimu3g00299 3 2840026 2842191 PCT