Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00181 ATGGGTTCTTCCAACCAAGAAAGAGAATCATCACCGCTTTCCAGTAACTTTCCCTCAGAAAAATCCATGGACCACCCACCACCTCCACCAACCACCACATACCCCACCCATCCACCACCGCCGATGTATTACCCGAATCCTCATGGATACCCCCACCCATATCCTAATGCTTACCCTCCCGGTTACCATTACCCTGCACCCGCCCCTTACTATGGTCCCCCTCCCCCCTACCAAAGAAGATCTTCTTCATGTTGTTCTCGGTGCTGTAGAAGCTTCATCATGTGTTGCTTGCTCATGCTCACCATCTTCTTTCTCATGAGCCTCTTTCTAGCTTTGGCGCTACATCCGCAACTACCTCTCTACAAGGTTGTCTCCTTGTCTGTTACAAACTTTACAACCCAACCAACCCTAGGTGGTCAATTTGACACCAAAATTTCCATTGAAAACCCCAACGACAAACTTGTCGGTTATTTCTCCGACTTTAAGGTTTTCATGTCGTACAAGGATGGAATGGTGGCGGCTGGTGCTGCGCCCGGACTTGCGTTGAGTACGAAGTCTCAAACAGATGTGATCGTAAGGGGTTTGTTCAACCAAGGGAACAAAAATTCATTGGAACCGAAAGTAATGGATGATTTGGTGAAAGAACGAGGTACAAACTCCGTTACCTTCAGTTTGAGGACGTCTTCCTTGATCGTTCTTAAGTCTAATACGTTTACCACGAAGAGTGAAGAGCTTCTTGCAATTTGTGATGGGTTGAGGGTGAAGTTTCAAGATAATAGTACCACTTCTGGAGAATTGGACAACAACGGAAAACCAGTTCCATGCATGATATATATTTGA 840 0.4607 MGSSNQERESSPLSSNFPSEKSMDHPPPPPTTTYPTHPPPPMYYPNPHGYPHPYPNAYPPGYHYPAPAPYYGPPPPYQRRSSSCCSRCCRSFIMCCLLMLTIFFLMSLFLALALHPQLPLYKVVSLSVTNFTTQPTLGGQFDTKISIENPNDKLVGYFSDFKVFMSYKDGMVAAGAAPGLALSTKSQTDVIVRGLFNQGNKNSLEPKVMDDLVKERGTNSVTFSLRTSSLIVLKSNTFTTKSEELLAICDGLRVKFQDNSTTSGELDNNGKPVPCMIYI 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00181 279 MobiDBLite consensus disorder prediction 1 21 - -
Vimu3g00181 279 MobiDBLite consensus disorder prediction 22 40 - -
Vimu3g00181 279 SUPERFAMILY beta-sandwich domain of Sec23/24 25 78 - -
Vimu3g00181 279 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 27 262 - -
Vimu3g00181 279 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00181 Vimu-Chr3 1526065 1526904 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00181 - - vum:124823497 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02285 6 19997813 19998700 Vimu3g00181 3 1526065 1526904 PCT