Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00150 ATGAGTGACAGAAATGAAAATGTTGCAGAACTTGGGTTGAATTTGAACCTATCTCCACCAAGGGTTGCTGACAATAGACCTCAGTCTCCAACTCAATCAGCAGCAGTGTTACCAGGATCACCATCAAACTCATGTCTGTCCACTGAGCTTAACCAAGATGACAGTAATAACAACAACAATGTTGAAAACCCTAACAACCCAGAAGTTGTTTCCCTTATACTAGTGGGATGCCCTAATTGTCTCATGTATCTGATGATCAATGAGGATAAAAACCATTGCCCCAGATGCAAGAACACCACTTTGATTCATTTTCCTGATGACAAAAACCCTGTCATAAGAAATGGATAA 348 0.4023 MSDRNENVAELGLNLNLSPPRVADNRPQSPTQSAAVLPGSPSNSCLSTELNQDDSNNNNNVENPNNPEVVSLILVGCPNCLMYLMINEDKNHCPRCKNTTLIHFPDDKNPVIRNG 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00150 115 MobiDBLite consensus disorder prediction 1 66 - -
Vimu3g00150 115 PANTHER PUTATIVE-RELATED 7 105 - -
Vimu3g00150 115 MobiDBLite consensus disorder prediction 21 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00150 Vimu-Chr3 1222528 1222875 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00150 - - gmx:100805043 120.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g00150 3 1222528 1222875 Vimu6g02304 6 20145927 20146256 PCT