Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02907 ATGGCTTCTATCTCATGCATCACCCACCACCCCGTCACTTCCAAGCTAAAAAATTTCTCTCCCTCACCTGACGCTTCTACCTCAAACTTGGCCTCAAGGTTTCTGGGCATAAAAAAAAGTGTTGGTTGGCTCAGTCTCACCTCTAGAATTGGCCCCTCCAACGGCTCCAGAGCCACGTGCTGGTTCAGGTTCGGGAAGAACGGTGTTGATGCCGAAGGTGCTGGCATTTATGGCAGCCAGAGCCGTGATGACTTCGACAGAGATGATGTGGAGCAGTACTTCAACTACATGGGGATGCTTGCAGTAGATGGAACCTATGATAAAATGGAAGCCCTTCTAAGACTAAACATCCACCCTGTGGACATCCTTCTCCTATTAGCTGCATCAGAAGGTGACAAGCCAAAAATTGAAGAACTCCTGAGAGCTGGAGCAAAATATGATGTAAAAGATGGAGAGGGTAGGACCGCATTGGACCGAGCCAACGAAGAAATTAAAGAATTCATTCTTAATTTTTCAGTGCAAAGGGCATGA 531 0.4708 MASISCITHHPVTSKLKNFSPSPDASTSNLASRFLGIKKSVGWLSLTSRIGPSNGSRATCWFRFGKNGVDAEGAGIYGSQSRDDFDRDDVEQYFNYMGMLAVDGTYDKMEALLRLNIHPVDILLLLAASEGDKPKIEELLRAGAKYDVKDGEGRTALDRANEEIKEFILNFSVQRA 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02907 176 PANTHER PROTEIN LHCP TRANSLOCATION DEFECT 1 176 IPR044242 GO:0006886|GO:0009570|GO:0090391
Vimu2g02907 176 SUPERFAMILY Ankyrin repeat 99 170 IPR036770 -
Vimu2g02907 176 Gene3D - 121 175 IPR036770 -
Vimu2g02907 176 FunFam Protein LHCP TRANSLOCATION DEFECT 84 175 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02907 - - gmx:100499940 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02907 2 27524047 27527871 Vimu2g02907 2 27524047 27527871 ECH