Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02894 ATGAGTTGTATAATTATTTCAGTGGTGATAGAGTCAGAAAATGAAGCCAAAAAATCACAGGTTTTCGAGGAAAAAAAATTTGTTGGACGGTTTGTAAAGAGTGTTGTTCGAGTTGCATTCAAATGCCTTAGCCTTTCAGGAATATTGAGTATCATTGCGCAAATGGGAGTCAACCAGTCATTGAACTTGACAGAGGAGATACGCAGTTGGTGCAACACTTTATTACTCAGCAAGAGTTGCAAAATTGGACCAGCTTTGACTGGAGTTTACCATCCAATGATGGCCTATTTTGTATCTCTAAGGCTCTTGGTTGGATCTTTAAGGTTCTGCTCTAGCATGGTTCTAATGGATGTTCAACAATGGCTTACTCTCATCCTAGGACATCTTTCTCCGTGCTTTAGAGCTCAGACCTTAGCCAATCGCATTTCATATTACCCTCCTAGCTGTTATCTAAGTTGCTTTATCTTAGGTCTCAAACCCCATCTTCGACGAGAAGTTATAGCCCAAAAACCACCATGCCTTCCTCATGCCATTGCCTTAACCAAGCTTCATGATGAAAAATATCACACCTCACCACCACCGTTCAACCGATTTGGTCGTACAATCACTCCACCATCACCTACAACTATTGGTACATCTACTACACCCAAACCTCTCCCTCCATTTCTCCCAACACCCTCAACTAAACTTTCGATTAAACACCTCACAGAAGCAGAGATGCAAACACGAAGAGAGAAAAATCTTTGCTTTAATTACGATGAATGTTACACAAGGGACACTGTTGTAAGCCACAATTCTTACTCCTCACTACTTATGCCTCAAAGGAGCTTGACGATGACATACCACCAGAAGATTCTCAACCAACTGAGGAAGCACAATAAGAGGTCAGATTCATTAGTCTCCATGCCTTCTCTGGTCAATGGATTCCAAGGACACTTTGGTTTACATGATCTATCAAGGGCTATTGGGGAAACCCATAATTTCATCCAACATAGAGTGGCCAAATTTCTTCACTTAACTACTCAACCTACACCAAGCCCTTTACGCGTAATGGAGTCTAATTGGCTTTCCATGGTTAGCCCTTATATCATGGATTACAATGGCACTAATATGAGATTCCCTTGGAATGGTAAAATGGTCGAACTAAAGGGGATTCAAAACCACACCCTTCACCTATTTCTGCCCACCAGTGTATCTTTGTCAGTTCTCAATCAAGAATTGGAATCTGCAGCAAAAAAAGAGGAAAAGTTGGCTGCATATTTGACAGCAGCAAGAAACGGCATTACAGAAATTGTGGATGGACTTCACTCTAAAATTCCAAGTGTCATATATGAAACTAGCAGTAAAAGAGAAAATGTATTGCTTGTGGCAGTGAAGAATAAGCAAGTAAATGTTGTTGAGATGTTACAGAAGAGTTTGAAAAAGGAAAATTTTGATAGCTTAATTTTAGAAACGGATGACAGAAGGAACACAGTGCTACACTTAGCAGCAGGTACATCTAGCAACGAAAGAGTTGGTACTACCATGCAAATGATATGGGATATCAAGTGGTACCAGTACATCAGTGGTCTAGTGCCGAAAGAATTCATTTACAGACGTAACAAAGATGGTAAAACTGCATGGGAAATCTATGAACTGGAACACTTGAAGAAAGTGAAAGATTGTTCGGAGGCCCTGAAGGACTTATCCAATTCTGGCTCAGTTGTAGCAGCTCTAATTGCCGGCATCTCCTTCGCAACATCGACCACGGTTCCAGGCAGCACCGACGACGGAAAACCTATCTTAGGTGGCCAACCTGCATTTGATGTATTTGCCACGGCTTCCCTTATAGGACTTGGCTTCTCCATCACCGCACTGGTTATGTTCCTCGCCATACTCACTTCTCCAAAACAGGTTCAACATTTCCGCCTCAGCTTGCCCTTGAAGCTTATCTTTGGCTTAGGTTCTCTTTTTGCATCCGTTGCTTCAATGCTCGTTTCCTTTTGGGCTGCACATTTCTTTGTGCTCAATGAAAAGTACAATATGATTCTCCTCCCTGTTTATGTTGCCACTTGGTTTCCGATCACTATCTATGCACTGATGCAATTTCCATTTTATGTTGAGCTTGTGAGTGCAATTTTCAAGAAGGTGTCCAGGGAGACCGCCCGGGCGGTGAGGGCAACTCATGTAAGGCCTGGGCCTTCAATTTGGCTGCCCAAGCTTCGAGATCCCGCCGCCCGGGCGGCCAAGGTCACCGCCCGGGCAGCGAACATCGATTTTGCATGCTCAAGCTTCGTTTCTGGACGCCCAAGCTTTGTGTTGTCCCTCCTTCTAGTGCCTTTTTAA 2325 0.4314 MSCIIISVVIESENEAKKSQVFEEKKFVGRFVKSVVRVAFKCLSLSGILSIIAQMGVNQSLNLTEEIRSWCNTLLLSKSCKIGPALTGVYHPMMAYFVSLRLLVGSLRFCSSMVLMDVQQWLTLILGHLSPCFRAQTLANRISYYPPSCYLSCFILGLKPHLRREVIAQKPPCLPHAIALTKLHDEKYHTSPPPFNRFGRTITPPSPTTIGTSTTPKPLPPFLPTPSTKLSIKHLTEAEMQTRREKNLCFNYDECYTRDTVVSHNSYSSLLMPQRSLTMTYHQKILNQLRKHNKRSDSLVSMPSLVNGFQGHFGLHDLSRAIGETHNFIQHRVAKFLHLTTQPTPSPLRVMESNWLSMVSPYIMDYNGTNMRFPWNGKMVELKGIQNHTLHLFLPTSVSLSVLNQELESAAKKEEKLAAYLTAARNGITEIVDGLHSKIPSVIYETSSKRENVLLVAVKNKQVNVVEMLQKSLKKENFDSLILETDDRRNTVLHLAAGTSSNERVGTTMQMIWDIKWYQYISGLVPKEFIYRRNKDGKTAWEIYELEHLKKVKDCSEALKDLSNSGSVVAALIAGISFATSTTVPGSTDDGKPILGGQPAFDVFATASLIGLGFSITALVMFLAILTSPKQVQHFRLSLPLKLIFGLGSLFASVASMLVSFWAAHFFVLNEKYNMILLPVYVATWFPITIYALMQFPFYVELVSAIFKKVSRETARAVRATHVRPGPSIWLPKLRDPAARAAKVTARAANIDFACSSFVSGRPSFVLSLLLVPF 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02894 774 Gene3D - 404 549 IPR036770 -
Vimu2g02894 774 Pfam Domain of unknown function 557 667 IPR026961 -
Vimu2g02894 774 PANTHER CASKIN 342 708 - -
Vimu2g02894 774 MobiDBLite consensus disorder prediction 194 223 - -
Vimu2g02894 774 SUPERFAMILY Ankyrin repeat 421 504 IPR036770 -
Vimu2g02894 774 MobiDBLite consensus disorder prediction 201 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02894 Vimu-Chr2 27337753 27347690 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02894 402 730 Miscellaneous Gene Families AT3G12360 24.409 2.96e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02894 - - vra:106775535 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02894 2 27337753 27347690 Vimu2g02894 2 27337753 27347690 ECH