Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02893 ATGAATTGGATGAAGGAAGCTGAAGTGGTAAGGAGTTGGACTCAAGAGAAGAAGGAAAAGTGCTTAAAAGAAGAATCACAGACACCGCTGAGCACAAATCCACCGCTGAACGCCAGCCTCATGGAGGAGGCGAATGTACAAGAGAGGATGAGATATCGCTGTTCCGAGGGTGCGTGTTGGAAGGAAGATGGGATGAATGATGGGAAAGTGGAGCTTGTTAATACTCTTGTTGGAGCAATATTGAATCACGAAGGAAGGGAAGCGTTGAGGGATGACAGTGCACTGAGATCAACGAATGAGAGAGGTGACACTCCTTTGCACCTTGCAGCCTCAAGAGGGTTCATTTCCATTTGCATGTGCATCATTGGGGAAAATGGTGAAAGGAAAGATTTGATTAGGGATAGGAACAAAGATGGTGAAACACCTCTTTTCAGGGCCGTGCGCACATGCCAAACACAGGCCTTTGTGTACCTTCACAATGTTTCCAAAGATTTAGATGTTAAACATAGGAACTATGATGGTCAAACCCTACTTCACTTAGCCATCTGGGGAGAATTCTTGGATTTGGCTATTATGATTGCCCATTGTTATCCTGAACTTGTCAACGTCCGAAACATGTACGGAAATATTCCTCTCCAAGTTCTTGCTAGTAGGCCTTCCTCCTTCAAGAGCGGAACCGATTTCTCCTGGGACAAGTCTGGCATCGAGAGACGGGTATTCCATGACTTGATTTTGTTAGTTTTGAAACTGGCAAAACAAATGTTCGTAAGCCTCATCAAGTGTTTCTAG 789 0.4474 MNWMKEAEVVRSWTQEKKEKCLKEESQTPLSTNPPLNASLMEEANVQERMRYRCSEGACWKEDGMNDGKVELVNTLVGAILNHEGREALRDDSALRSTNERGDTPLHLAASRGFISICMCIIGENGERKDLIRDRNKDGETPLFRAVRTCQTQAFVYLHNVSKDLDVKHRNYDGQTLLHLAIWGEFLDLAIMIAHCYPELVNVRNMYGNIPLQVLASRPSSFKSGTDFSWDKSGIERRVFHDLILLVLKLAKQMFVSLIKCF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02893 262 Gene3D - 65 225 IPR036770 -
Vimu2g02893 262 Pfam Ankyrin repeats (3 copies) 68 164 IPR002110 GO:0005515
Vimu2g02893 262 PANTHER NO MECHANORECEPTOR POTENTIAL C, ISOFORM D-RELATED 68 230 - -
Vimu2g02893 262 SMART ANK_2a 138 167 IPR002110 GO:0005515
Vimu2g02893 262 SMART ANK_2a 101 130 IPR002110 GO:0005515
Vimu2g02893 262 SMART ANK_2a 173 203 IPR002110 GO:0005515
Vimu2g02893 262 SUPERFAMILY Ankyrin repeat 95 220 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02893 Vimu-Chr2 27326803 27332119 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02893 - - vra:106775535 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02893 2 27326803 27332119 Vimu2g02893 2 27326803 27332119 ECH