Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02759 ATGGGAAAGTTTGCCCTAGCTAATGTCCTATTGTTCCTTCTCCTTAACCTCACAACCTTCCTCAATGTTCTTGCTTGTCCTTATTGCCCTTACCCTTCTCCTAAGCCCCCAAAACACACTCCCATAGTGAAACCACCCAAACCATGTCCACCACCCCATTCATCTCCCAAACCTCCACATGTGAATCCACCCTATGTTCCGAAACCCCCTCACTACCCTAAGCCACCAGTCCATCCACACCCACCCTATGTCCCAAAACCCCCTCACTACCCTAAGCCACCAGTGCATCCACACCCACCCTATGTCCCAAAACCTCACCCTAGACCGCCAGTTCACCCACATCCCCCTCATTTTCCACAACCCCCAGTTGTCAAGCCACCCCCATATGTCCCCAAACCACCGGTTGTCACACCACCTTACACCCCTAAACCACCGGTTGTCACACCACCTTACATCCCTAAACCACCGGTTGTCACACCACCTTACATCCCTAAACCACCGGTTGTCCCGGTTATTCCTCCTTACATCCCAAAACCTCCGGTTGTCCCCGTTATACCTCCTTACGTCCCTCCTTACGTTCCCAAACCACCAGTTGTTCCCGTTACACCACCTTATGTGCCAAAACCACCCATTAACCCTCCCGTGGTTCCTTTGCCACCAGTTCAACCAACTCCACCCACTGTGACACCACCAAGCCCTCCAAGTGAAACGCCATGTCCACCACCACCACCATCACCGACACCAGTGGTGCCATACCCTCCACCAGCACAACCAACATGCCCTATTGACTCTCTAAAACTGGGAGCGTGTGTGGATGTGCTCGGTGGCCTCATCCACATAGGTATTGGAAGCAGTGCTAAACAGACATGTTGTCCAGTTCTTGCAGGGCTTGTTGACTTGGATGCTGCAGTTTGTCTCTGCACAACCATTAGGGCCAAGATCCTTAACATCAACATCATAATCCCCATTGCTCTTCAGCTTCTCATTGACTGTGGCAAGACCCCACCAGATGGATTCAAGTGTGCAGATAGTTAG 1035 0.5179 MGKFALANVLLFLLLNLTTFLNVLACPYCPYPSPKPPKHTPIVKPPKPCPPPHSSPKPPHVNPPYVPKPPHYPKPPVHPHPPYVPKPPHYPKPPVHPHPPYVPKPHPRPPVHPHPPHFPQPPVVKPPPYVPKPPVVTPPYTPKPPVVTPPYIPKPPVVTPPYIPKPPVVPVIPPYIPKPPVVPVIPPYVPPYVPKPPVVPVTPPYVPKPPINPPVVPLPPVQPTPPTVTPPSPPSETPCPPPPPSPTPVVPYPPPAQPTCPIDSLKLGACVDVLGGLIHIGIGSSAKQTCCPVLAGLVDLDAAVCLCTTIRAKILNINIIIPIALQLLIDCGKTPPDGFKCADS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02759 344 MobiDBLite consensus disorder prediction 222 248 - -
Vimu2g02759 344 MobiDBLite consensus disorder prediction 42 71 - -
Vimu2g02759 344 CDD HPS_like 258 341 IPR027923 -
Vimu2g02759 344 Gene3D - 257 343 IPR036312 -
Vimu2g02759 344 Pfam Hydrophobic seed protein 259 342 IPR027923 -
Vimu2g02759 344 PANTHER - 9 341 - -
Vimu2g02759 344 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 262 342 IPR036312 -
Vimu2g02759 344 PRINTS Proline rich extensin signature 25 46 - -
Vimu2g02759 344 PRINTS Proline rich extensin signature 89 114 - -
Vimu2g02759 344 PRINTS Proline rich extensin signature 48 64 - -
Vimu2g02759 344 PRINTS Proline rich extensin signature 66 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02759 Vimu-Chr2 25040162 25042485 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02759 253 341 Acyl Lipid Metabolism Gene Families AT4G22520 36.957 3.49e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02759 - - vum:124838152 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02759 2 25040162 25042485 Vimu2g02759 2 25040162 25042485 ECH