Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02469 ATGGCCATGCTTGCTCTCACGAACCCAACTTCTATTCGCCACAATGCATTCTCTTATTCTTCTTCTTCCTCTTTCGCTCTCAGAACCAGAACGTGCGTCACTGCACCCCCGCGACGTCGTTTCGCGTCCGTGAGGTGCTGCTCCTTCTCGACACCCGAGAGCGCCAAGATTAAGGTTGTCGGCGTCGGGGGCGGCGGGAACAATGCCGTTAACCGCATGATTGGTTGCGGATTGCACGGTGTAGAATTTTATGCTATAAATACCGATGCCCAAGCACTGTTGCATTCTGCTGCCGAGAACCCTATCAAAATTGGAGAGCTTCTGACTCGGGGATTAGGTCAGGCACTTTTGCTTGATAGAGATGCAGGTACTGGGGGAAATCCACTTTTGGGGGAACAAGCTGCTGAGGAATCTAAAGATGCTATTGCTAGTGCTCTTCAAGGATCTGATTTAGTGTTCGTAACTGCTGGCATGGGTGGGGGAACTGGGTCCGGTGCCGCACCAGTAGTGGCCCGAGTGTTGTTACCTATCCCTTCAGTTTTGAAGGACGCAAAAGATCATTGCAGGCAGGCACTGGAAGCCATTGAAAAGCTGCAGAAAAATGTGGATACTCTTATAGTGATTCCAAATGACCGCCTCCTTGACATGGCTGATGAGCAGACACCTCTTCAGGATGCTTTCCGTCTGGCAGATGATGTTCTGAGGCAAGGAGTGCAGGGAATATCAGACATCATAACAGGTAGATTGAGAAGAGTAAGAGGGTACATTACAGGCTTGATGTCGGTATATGAGGATGATATTCCTACTGTCTTTTTACAGATACCTGGGCTTGTAAATGTGGATTTCGCTGATGTAAAAGCTGTGATGAAAGACTCTGGAACAGCAATGCTTGGTGTGGGTGTTTCCTCCAGTAAAAATCGTGCCGAAGAAGCTGCAGAGCAGGCTACTTTGGCTCCTTTAATCGGCTCTTCTATTCAGTCAGCTACTGGAGTGGTGTATAATATTACTGGAGGAAAAGACATAACTCTGCAGGAAGTAAACAGAGTGTCTCAGGTGGTGACAAGTTTAGCTGACCCTTCTGCCAATATCATATTCGGTGCCGTTGTTGATGATCGCTACAATGGGGAGATTCATGTGACTATCATTGCAACTGGTTTCTCGCAGTCCTTCCAAAAGACACTACTAACAGATCCAAGGGCAGCAAAGTTGCTTGACAGAGTGCCTGAGGGCCAAGAAAGCAAGGCGACTTCCTCTTCTCTCAAATCCTCAAACTATCCAACAGTTGGATCTAGAGCATCCCCACGAAAGCTCTTCTTTTAG 1320 0.4795 MAMLALTNPTSIRHNAFSYSSSSSFALRTRTCVTAPPRRRFASVRCCSFSTPESAKIKVVGVGGGGNNAVNRMIGCGLHGVEFYAINTDAQALLHSAAENPIKIGELLTRGLGQALLLDRDAGTGGNPLLGEQAAEESKDAIASALQGSDLVFVTAGMGGGTGSGAAPVVARVLLPIPSVLKDAKDHCRQALEAIEKLQKNVDTLIVIPNDRLLDMADEQTPLQDAFRLADDVLRQGVQGISDIITGRLRRVRGYITGLMSVYEDDIPTVFLQIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGFSQSFQKTLLTDPRAAKLLDRVPEGQESKATSSSLKSSNYPTVGSRASPRKLFF 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02469 439 ProSitePatterns FtsZ protein signature 2. 150 171 IPR020805 GO:0005525
Vimu2g02469 439 Pfam Tubulin/FtsZ family, GTPase domain 56 217 IPR003008 GO:0005525
Vimu2g02469 439 PRINTS Cell division protein FtsZ signature 283 304 IPR003008 GO:0005525
Vimu2g02469 439 PRINTS Cell division protein FtsZ signature 151 171 IPR003008 GO:0005525
Vimu2g02469 439 PRINTS Cell division protein FtsZ signature 260 282 IPR003008 GO:0005525
Vimu2g02469 439 SUPERFAMILY Tubulin C-terminal domain-like 278 393 IPR008280 -
Vimu2g02469 439 MobiDBLite consensus disorder prediction 411 430 - -
Vimu2g02469 439 FunFam Cell division protein FtsZ 1, chloroplastic 292 398 - -
Vimu2g02469 439 SUPERFAMILY Tubulin nucleotide-binding domain-like 56 246 IPR036525 -
Vimu2g02469 439 Hamap Cell division protein FtsZ [ftsZ]. 52 429 IPR000158 GO:0003924|GO:0005525
Vimu2g02469 439 Pfam FtsZ family, C-terminal domain 293 386 IPR024757 -
Vimu2g02469 439 CDD FtsZ_type1 72 385 IPR000158 GO:0003924|GO:0005525
Vimu2g02469 439 Gene3D Tubulin/FtsZ, GTPase domain 49 291 IPR036525 -
Vimu2g02469 439 SMART Tubulin_4 56 249 IPR003008 GO:0005525
Vimu2g02469 439 MobiDBLite consensus disorder prediction 407 439 - -
Vimu2g02469 439 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 159 165 IPR017975 GO:0005525|GO:0005874|GO:0007017
Vimu2g02469 439 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 44 399 IPR045061 GO:0003924|GO:0005525
Vimu2g02469 439 SMART Tubulin_C_4 278 395 IPR018316 -
Vimu2g02469 439 Coils Coil 181 201 - -
Vimu2g02469 439 Gene3D - 292 397 IPR037103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02469 Vimu-Chr2 20423923 20426224 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02469 K03531 - gmx:100809043 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02469 2 20423923 20426224 Vimu2g02469 2 20423923 20426224 ECH