Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02368 ATGCTGCCGGTTCTCGCGGCGGCGTTCCTCCTCCTCGCCACCCTTTCCCAAGCGCACAACATCACGCGCATTCTCGCCCAGCACCCGGAGTTCTCCACTTTCAACCACTACCTCACCCTCACGCACCTCGCCCCCGAAATCAACGGAAGAACCACTATCACCGTCTGCGCCGTCGACAACTCCGCCATGGACGACCTCCTCTCCAAGCACCCCTCCATCTACACCGTCAAAAACATCCTCTCCCTCCACGTCCTCCTCGACTATTTCGGCGCCAAGAAGCTCCACCAGATCACGAACGGCACAGCGCTCGCCGCCACCATGTACCAGGCCACCGGCACCGCCCCGGGCTCAGCCGGCTTCGTCAACATCACCGACCTCCACGGCGGTAAGGTCGGATTCGGCGCCGAAAACAACGACGGAACCCTGACCTCCACCTTCGTGAAATCCGTGGAAGAAATCCCTTACAACATCTCCGTTATCCAGATCAGCAAAATTCTACCTTCGGCTGCAGCGGAAGCCCCTGCACCCGCGCCGGCGCAGCAAAACCTCACCAGCATTATGTCCAAACACGGTTGCAAAGTCTTCGCCGACACTCTTTCTAACTTTAGCGACGCACTTTCCACCTTCAACGACAACCTCGACGGTGGATTAACTGTTTTCTGCCCCCTCGACGACGCCTTCAAAGCGTTCCTCCCCAAATTCAAAAACCTAACCGCTTCTGGCAAACTCGCGCTTCTCGAATTCCATGGCGTGCCGGTGTACCAATCCCTTGCTACACTGAAATCGAACAATGGACTTCAGAACACCTTGGCCACCGACGGAGCTAACAAATTCGATTTCACAGTACAAAACGACGGCGAAGATGTCACTCTCAAGACGAGGCTCACCACGGCTAAGATCACGGACACCATAATCGATGAACAGCCTCTCGCGGTTTTCGCCATCAGTAAGGTGCTTCTCCCTAAGGAGTTGTTCAAGGAGCCTTCTGCTGCCGACGCTCCTGCGCCAGCGAAGAAGGGGAAGAAGAAGAAGAAGGCTGCTGATGCACCTGCTGCGGATGAGAATTCCGACGCGCCGGCGGACTCACCCGGGGACGCCGCCGATGATACCGCTGACGACAGTAATGGCGCCGTTAGCGGCGGGAGTTATGGTAATGTTGTTGTTGCCTTGGGTTTGGTTTTGGGGTTACCGTTAGTGCTGTGA 1203 0.5669 MLPVLAAAFLLLATLSQAHNITRILAQHPEFSTFNHYLTLTHLAPEINGRTTITVCAVDNSAMDDLLSKHPSIYTVKNILSLHVLLDYFGAKKLHQITNGTALAATMYQATGTAPGSAGFVNITDLHGGKVGFGAENNDGTLTSTFVKSVEEIPYNISVIQISKILPSAAAEAPAPAPAQQNLTSIMSKHGCKVFADTLSNFSDALSTFNDNLDGGLTVFCPLDDAFKAFLPKFKNLTASGKLALLEFHGVPVYQSLATLKSNNGLQNTLATDGANKFDFTVQNDGEDVTLKTRLTTAKITDTIIDEQPLAVFAISKVLLPKELFKEPSAADAPAPAKKGKKKKKAADAPAADENSDAPADSPGDAADDTADDSNGAVSGGSYGNVVVALGLVLGLPLVL 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02368 400 Pfam Fasciclin domain 29 105 IPR000782 -
Vimu2g02368 400 Pfam Fasciclin domain 199 321 IPR000782 -
Vimu2g02368 400 Gene3D FAS1 domain 16 167 IPR036378 -
Vimu2g02368 400 Gene3D FAS1 domain 180 322 IPR036378 -
Vimu2g02368 400 ProSiteProfiles FAS1/BIgH3 domain profile. 18 166 IPR000782 -
Vimu2g02368 400 FunFam Fasciclin-like arabinogalactan protein 10 172 322 - -
Vimu2g02368 400 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 385 IPR033254 -
Vimu2g02368 400 MobiDBLite consensus disorder prediction 329 377 - -
Vimu2g02368 400 FunFam Fasciclin-like arabinogalactan protein 2 17 159 - -
Vimu2g02368 400 SUPERFAMILY FAS1 domain 175 322 IPR036378 -
Vimu2g02368 400 ProSiteProfiles FAS1/BIgH3 domain profile. 179 319 IPR000782 -
Vimu2g02368 400 SUPERFAMILY FAS1 domain 24 166 IPR036378 -
Vimu2g02368 400 SMART fasc_3 54 169 IPR000782 -
Vimu2g02368 400 SMART fasc_3 218 322 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02368 Vimu-Chr2 19254571 19255803 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02368 - - gmx:100810878 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02368 2 19254571 19255803 Vimu2g02368 2 19254571 19255803 ECH